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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107810485   protein RDM1-like 
 nta-r.1   107775798   protein RDM1 
 sly-u.5   101255147   protein RDM1 
 sot-r.1   107062706   protein RDM1-like 
 sot-r.1   107063298   protein RDM1-like 
 sot-r.1   102594055   protein RDM1-like 
 ath-u.5   RDM1   RNA-DIRECTED DNA METHYLATION 1 
 gma-u.5   100780782   protein RDM1 
 gma-u.5   100500129   uncharacterized LOC100500129 
 bra-r.6   103859969   protein RDM1 
 bra-r.6   103869016   protein RDM1 
 vvi-u.5   100244199   protein RDM1 
 ppo-u.5   7473419   protein RDM1 
 mtr-u.5   11443154   protein RDM1 
 ghi-r.1   107914882   protein RDM1 
 ghi-r.1   107897696   protein RDM1 
 bna-r.1   125596867   protein RDM1-like 
 bna-r.1   111214661   protein RDM1 
 bna-r.1   125608770   protein RDM1-like 
 cit-r.1   102618009   protein RDM1 

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Top 50 coexpressed genes to 107810485 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107810485 (nta-r.1 coexpression data)

CoexMap"107810485"


ntaLOC107810485 | Entrez gene ID : 107810485      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit sbi cre tae zma osa bdi hvu
Paralog 2 1 3 1 2 2 1 1 1 2 3 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (26 genes)  IEA  
GO CC
GO:0000419 [list] [network] RNA polymerase V complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
Protein XP_016490761.1 [sequence] [blastp]
XP_075110939.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  extr 1  (predict for XP_016490761.1)
nucl 6,  cyto_nucl 5,  cyto 2  (predict for XP_075110939.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016490761.1)
other 7,  mito 3  (predict for XP_075110939.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107810485
nta-r.1
for
107775798
sly-u.5
for
101255147
sot-r.1
for
107062706
sot-r.1
for
107063298
sot-r.1
for
102594055
ath-u.5
for
RDM1
gma-u.5
for
100780782
gma-u.5
for
100500129
bra-r.6
for
103859969
bra-r.6
for
103869016
vvi-u.5
for
100244199
ppo-u.5
for
7473419
mtr-u.5
for
11443154
ghi-r.1
for
107914882
ghi-r.1
for
107897696
bna-r.1
for
125596867
bna-r.1
for
111214661
bna-r.1
for
125608770
cit-r.1
for
102618009


Ortholog ID: 9501
Species nta nta sly sot sot sot ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit
Symbol LOC107810485 LOC107775798 LOC101255147 LOC107063298 LOC102594055 LOC102587972 RDM1 LOC100780782 LOC100500129 LOC103859969 LOC103869016 LOC100244199 LOC7473419 LOC11443154 LOC107914882 LOC107897696 LOC125608770 LOC106395418 LOC106451773 LOC102618009
Function* protein RDM1-like protein RDM1 protein RDM1 protein RDM1-like protein RDM1-like protein RDM1-like RNA-DIRECTED DNA METHYLATION 1 protein RDM1 uncharacterized LOC100500129 protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1-like protein RDM1-like protein RDM1-like protein RDM1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot03040 Spliceosome 4
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107810485 107775798 101255147 107063298 102594055 102587972 821839 100780782 100500129 103859969 103869016 100244199 7473419 11443154 107914882 107897696 125608770 106395418 106451773 102618009
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