ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107812848	protein SAR DEFICIENT 1-like
nta-r.1	107831052	calmodulin-binding protein 60 B
nta-r.1	107800838	protein SAR DEFICIENT 1
nta-r.1	107804452	calmodulin-binding protein 60 B
sly-u.5	101268806	calmodulin-binding protein 60 D
sly-u.5	101267354	calmodulin-binding protein 60 B
sly-u.5	101256262	protein SAR DEFICIENT 1-like
sot-r.1	102585109	protein SAR DEFICIENT 1
sot-r.1	102581064	calmodulin-binding protein 60 B-like
sot-r.1	102583829	calmodulin-binding protein 60 A
ath-u.5	AT2G18750	Calmodulin-binding protein
ath-u.5	SARD1	Calmodulin binding protein-like protein
ath-u.5	AT5G62570	Calmodulin binding protein-like protein
gma-u.5	100804548	calmodulin-binding protein 60 A
gma-u.5	100805759	calmodulin-binding protein 60 D
gma-u.5	100806393	calmodulin-binding protein 60 B
bra-r.6	103845193	calmodulin-binding protein 60 B
bra-r.6	103830730	protein SAR DEFICIENT 1
bra-r.6	103854686	calmodulin-binding protein 60 G
vvi-u.5	104881366	calmodulin-binding protein 60 B
vvi-u.5	100264980	calmodulin-binding protein 60 B
vvi-u.5	100255354	calmodulin-binding protein 60 A
ppo-u.5	7489462	calmodulin-binding protein 60 E
ppo-u.5	7478912	calmodulin-binding protein 60 B
ppo-u.5	7485590	calmodulin-binding protein 60 B
mtr-u.5	11436711	protein SAR DEFICIENT 1
mtr-u.5	11426495	protein SAR DEFICIENT 1
mtr-u.5	11423826	calmodulin-binding protein 60 D
ghi-r.1	107919851	calmodulin-binding protein 60 B
ghi-r.1	107918457	calmodulin-binding protein 60 C
ghi-r.1	107914004	calmodulin-binding protein 60 B
bna-r.1	106442801	calmodulin-binding protein 60 D
bna-r.1	106350689	calmodulin-binding protein 60 G-like
bna-r.1	106430980	calmodulin-binding protein 60 C
cit-r.1	102612087	protein SAR DEFICIENT 1-like
cit-r.1	102625149	hypothetical protein
osa-u.5	4325688	protein SAR DEFICIENT 1
osa-u.5	4328487	calmodulin-binding protein 60 C
osa-u.5	107276160	protein SAR DEFICIENT 1
zma-u.5	100283672	calmodulin binding protein
zma-u.5	100285136	calmodulin binding protein
zma-u.5	100286080	uncharacterized LOC100286080
tae-r.2	123105718	calmodulin-binding protein 60 A
tae-r.2	123076922	calmodulin-binding protein 60 B
hvu-r.1	123453101	calmodulin-binding protein 60 A-like
hvu-r.1	123426811	calmodulin-binding protein 60 D-like
sbi-r.1	8071013	protein SAR DEFICIENT 1
sbi-r.1	8079711	calmodulin-binding protein 60 A
bdi-r.1	100822237	calmodulin-binding protein 60 B
bdi-r.1	100825599	protein SAR DEFICIENT 1

Top 50 coexpressed genes to 107812848 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107812848 (nta-r.1 coexpression data)

CoexMap"107812848"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0080142 [list] [network] regulation of salicylic acid biosynthetic process

(25 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(4980 genes)

IEA

GO MF

GO:0005516 [list] [network] calmodulin binding	(59 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(1306 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(2091 genes)	IEA

Protein

XP_016493507.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1

(predict for XP_016493507.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016493507.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107812848	nta-r.1 for 107831052	nta-r.1 for 107800838	nta-r.1 for 107804452	sly-u.5 for 101268806	sly-u.5 for 101267354	sly-u.5 for 101256262	sot-r.1 for 102585109	sot-r.1 for 102581064	sot-r.1 for 102583829	ath-u.5 for AT2G18750	ath-u.5 for SARD1	ath-u.5 for AT5G62570	gma-u.5 for 100804548	gma-u.5 for 100805759	gma-u.5 for 100806393	bra-r.6 for 103845193	bra-r.6 for 103830730	bra-r.6 for 103854686	vvi-u.5 for 104881366	vvi-u.5 for 100264980	vvi-u.5 for 100255354	ppo-u.5 for 7489462	ppo-u.5 for 7478912	ppo-u.5 for 7485590	mtr-u.5 for 11436711	mtr-u.5 for 11426495	mtr-u.5 for 11423826	ghi-r.1 for 107919851	ghi-r.1 for 107918457	ghi-r.1 for 107914004	bna-r.1 for 106442801	bna-r.1 for 106350689	bna-r.1 for 106430980	cit-r.1 for 102612087	cit-r.1 for 102625149	osa-u.5 for 4325688	osa-u.5 for 4328487	osa-u.5 for 107276160	zma-u.5 for 100283672	zma-u.5 for 100285136	zma-u.5 for 100286080	tae-r.2 for 123105718	tae-r.2 for 123076922	hvu-r.1 for 123453101	hvu-r.1 for 123426811	sbi-r.1 for 8071013	sbi-r.1 for 8079711	bdi-r.1 for 100822237	bdi-r.1 for 100825599

Ortholog

Ortholog ID: 166

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 D

protein SAR DEFICIENT 1-like

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 A

protein SAR DEFICIENT 1-like

Calmodulin-binding protein

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 D

calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 A

calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 A

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

protein SAR DEFICIENT 1

calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

protein SAR DEFICIENT 1-like

calmodulin-binding protein 60 A

protein SAR DEFICIENT 1

calmodulin-binding protein 60 C

calmodulin-binding protein 60 D

calmodulin binding protein

Protein SAR DEFICIENT 1

Calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 B-like

calmodulin-binding protein 60 D-like

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

calmodulin-binding protein 60 A

calmodulin-binding protein 60 D

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00905	Brassinosteroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6
vvi04016	MAPK signaling pathway - plant	4
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo04626	Plant-pathogen interaction	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	2
sbi00410	beta-Alanine metabolism	2
sbi00770	Pantothenate and CoA biosynthesis	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107831052

107800838

107830019

101268806

101256262

101255950

102585109

102583829

102604313

816390

835862

828685

100812605

100816427

100798493

103831855

103863555

103874061

100264980

100255354

100256775

7478912

7453751

18097458

11421955

120575779

25496840

107914004

107925256

107886116

106430980

106397962

106346511

102612087

102629177

4325688

4328487

4332576

100283672

103649824

103653644

123076922

123406352

123404800

8079393

8066356

100822237

100835614

100840855

The preparation time of this page was 0.3 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	2	3	3	2	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107812848 (nta-r.1 coexpression data)

Top 50 enrichment test to 107812848 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**