Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107817673   photosystem II 10 kDa polypeptide, chloroplastic-like 
 nta-r.1   107816978   photosystem II 10 kDa polypeptide, chloroplastic 
 nta-r.1   107810205   photosystem II 10 kDa polypeptide, chloroplastic-like 
 nta-r.1   107804135   photosystem II 10 kDa polypeptide, chloroplastic-like 
 sly-u.5   PSBR   PSII polypeptide 
 sly-u.5   101252753   photosystem II 10 kDa polypeptide, chloroplastic 
 sot-r.1   PSBR   photosystem II 10 kDa polypeptide, chloroplastic-like 
 sot-r.1   102604273   photosystem II 10 kDa polypeptide, chloroplastic-like 
 ath-u.5   PSBR   photosystem II subunit R 
 gma-u.5   100499745   uncharacterized LOC100499745 
 gma-u.5   100305752   photosystem II subunit R-like 
 bra-r.6   103832382   photosystem II 10 kDa polypeptide, chloroplastic-like 
 bra-r.6   103853163   photosystem II 10 kDa polypeptide, chloroplastic-like 
 bra-r.6   103830498   photosystem II 10 kDa polypeptide, chloroplastic-like 
 vvi-u.5   100243967   photosystem II 10 kDa polypeptide, chloroplastic 
 ppo-u.5   18095762   photosystem II 10 kDa polypeptide, chloroplastic 
 ppo-u.5   18095761   photosystem II 10 kDa polypeptide, chloroplastic 
 ppo-u.5   7454978   photosystem II 10 kDa polypeptide, chloroplastic 
 mtr-u.5   11446770   photosystem II 10 kDa polypeptide, chloroplastic 
 ghi-r.1   107903829   photosystem II 10 kDa polypeptide, chloroplastic 
 ghi-r.1   121213740   photosystem II 10 kDa polypeptide, chloroplastic 
 ghi-r.1   121203742   photosystem II 10 kDa polypeptide, chloroplastic 
 bna-r.1   125602014   photosystem II 10 kDa polypeptide, chloroplastic-like 
 bna-r.1   125589188   photosystem II 10 kDa polypeptide, chloroplastic-like 
 bna-r.1   106354761   photosystem II 10 kDa polypeptide, chloroplastic 
 cit-r.1   102626990   photosystem II 10 kDa polypeptide, chloroplastic 
 osa-u.5   4342395   photosystem II 10 kDa polypeptide, chloroplastic 
 osa-u.5   4344899   photosystem II 10 kDa polypeptide, chloroplastic 
 osa-u.5   107276047   photosystem II 10 kDa polypeptide, chloroplastic 
 zma-u.5   100281646   photosystem II3 
 tae-r.2   123146030   photosystem II 10 kDa polypeptide, chloroplastic 
 tae-r.2   123139414   photosystem II 10 kDa polypeptide, chloroplastic 
 hvu-r.1   123402786   photosystem II 10 kDa polypeptide, chloroplastic-like 
 hvu-r.1   123426277   photosystem II 10 kDa polypeptide, chloroplastic-like 
 hvu-r.1   123426278   photosystem II 10 kDa polypeptide, chloroplastic 
 sbi-r.1   8079922   photosystem II 10 kDa polypeptide, chloroplastic 
 sbi-r.1   8071154   photosystem II 10 kDa polypeptide, chloroplastic 
 bdi-r.1   100827496   photosystem II 10 kDa polypeptide, chloroplastic 
 bdi-r.1   100831370   photosystem II 10 kDa polypeptide, chloroplastic 
 cre-r.1   CHLRE_06g261000v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107817673 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107817673 (nta-r.1 coexpression data)

CoexMap"107817673"


ntaLOC107817673 | Entrez gene ID : 107817673    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 2 3 1 3 1 3 3 1 3 1 2 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00195 [list] [network] Photosynthesis (136 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (219 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (48 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (65 genes)  IEA  
GO:0042651 [list] [network] thylakoid membrane  (246 genes)  IEA  
GO MF
Protein XP_075075923.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  mito 1  (predict for XP_075075923.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_075075923.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107817673
nta-r.1
for
107816978
nta-r.1
for
107810205
nta-r.1
for
107804135
sly-u.5
for
PSBR
sly-u.5
for
101252753
sot-r.1
for
PSBR
sot-r.1
for
102604273
ath-u.5
for
PSBR
gma-u.5
for
100499745
gma-u.5
for
100305752
bra-r.6
for
103832382
bra-r.6
for
103853163
bra-r.6
for
103830498
vvi-u.5
for
100243967
ppo-u.5
for
18095762
ppo-u.5
for
18095761
ppo-u.5
for
7454978
mtr-u.5
for
11446770
ghi-r.1
for
107903829
ghi-r.1
for
121213740
ghi-r.1
for
121203742
bna-r.1
for
125602014
bna-r.1
for
125589188
bna-r.1
for
106354761
cit-r.1
for
102626990
osa-u.5
for
4342395
osa-u.5
for
4344899
osa-u.5
for
107276047
zma-u.5
for
100281646
tae-r.2
for
123146030
tae-r.2
for
123139414
hvu-r.1
for
123402786
hvu-r.1
for
123426277
hvu-r.1
for
123426278
sbi-r.1
for
8079922
sbi-r.1
for
8071154
bdi-r.1
for
100827496
bdi-r.1
for
100831370
cre-r.1
for
CHLRE_06g261000v5


Ortholog ID: 2960
Species nta nta nta sly sly sot sot ath gma gma bra bra bra vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna cit osa osa osa zma tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol LOC107817673 LOC107816978 LOC107810205 PSBR LOC101252753 PSBR LOC102604273 PSBR LOC100499745 LOC100305752 LOC103832382 LOC103853163 LOC103830498 LOC100243967 LOC18095761 LOC7454978 LOC7470970 LOC11446770 LOC107903829 LOC121213740 LOC121203742 LOC106354761 LOC106353419 LOC125594920 LOC102626990 LOC4342395 LOC4344899 LOC107276047 LOC100281646 LOC123146030 LOC123139111 LOC123402786 LOC123426277 LOC123426278 LOC8079922 LOC8071154 LOC100827496 LOC100831370 CHLRE_06g261000v5
Function* photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic-like PSII polypeptide photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II subunit R uncharacterized LOC100499745 photosystem II subunit R-like photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II3 photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic-like photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic photosystem II 10 kDa polypeptide, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 15
nta03040 Spliceosome 2
nta04144 Endocytosis 2
nta00480 Glutathione metabolism 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 13
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 14
nta00196 Photosynthesis - antenna proteins 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 11
sly00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 9
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 6
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra01200 Carbon metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 11
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 6
ppo00630 Glyoxylate and dicarboxylate metabolism 4
ppo00195 Photosynthesis 3
ppo01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
ppo01200 Carbon metabolism 5
ppo00630 Glyoxylate and dicarboxylate metabolism 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 4
mtr00195 Photosynthesis 4
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi00195 Photosynthesis 2
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi00195 Photosynthesis 2
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 15
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 5
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 10
zma00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
tae00906 Carotenoid biosynthesis 3
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 9
hvu00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 3
sbi00310 Lysine degradation 2
sbi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 7
sbi00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 13
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107817673 107816978 107810205 778297 101252753 102586254 102604273 844245 100499745 100305752 103832382 103853163 103830498 100243967 18095761 7454978 7470970 11446770 107903829 121213740 121203742 106354761 106353419 125594920 102626990 4342395 4344899 107276047 100281646 123146030 123139111 123402786 123426277 123426278 8079922 8071154 100827496 100831370 5722037
The preparation time of this page was 0.2 [sec].