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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107818682   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 sly-u.5   101248791   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 ath-u.5   AT4G30825   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100804693   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 vvi-u.5   100267412   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 ppo-u.5   7463649   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 mtr-u.5   11411682   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 osa-u.5   4347096   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 
 zma-u.5   103641195   pentatricopeptide repeat-containing protein At4g30825, chloroplastic 

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Top 50 coexpressed genes to 107818682 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107818682 (nta-r.1 coexpression data)

CoexMap"107818682"


ntaLOC107818682 | Entrez gene ID : 107818682      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016500205.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_016500205.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016500205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107818682
sly-u.5
for
101248791
ath-u.5
for
AT4G30825
gma-u.5
for
100804693
vvi-u.5
for
100267412
ppo-u.5
for
7463649
mtr-u.5
for
11411682
osa-u.5
for
4347096
zma-u.5
for
103641195


Ortholog ID: 11380
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107783502 LOC107818682 LOC101248791 LOC102600654 AT4G30825 LOC100804693 LOC103852325 LOC100267412 LOC7463649 LOC11411682 LOC121204598 LOC107912320 LOC106375459 LOC106434443 LOC102620440 LOC4347096 LOC103641195 LOC123103840 LOC123112074 LOC123397979 LOC8057871 LOC100830141
Function* pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic pentatricopeptide repeat-containing protein At4g30825, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi01230 Biosynthesis of amino acids 4
bdi00030 Pentose phosphate pathway 3
bdi00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107783502 107818682 101248791 102600654 829206 100804693 103852325 100267412 7463649 11411682 121204598 107912320 106375459 106434443 102620440 4347096 103641195 123103840 123112074 123397979 8057871 100830141
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