ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107819412	uncharacterized LOC107819412
nta-r.1	107809208	uncharacterized LOC107809208
nta-r.1	107773526	uncharacterized LOC107773526
nta-r.1	107807155	uncharacterized LOC107807155
sly-u.5	101267906	uncharacterized LOC101267906
sly-u.5	101245047	uncharacterized LOC101245047
sot-r.1	102594574	uncharacterized protein slr0889-like
sot-r.1	102599807	uncharacterized protein slr0889-like
ath-u.5	AT4G24810	Protein kinase superfamily protein
ath-u.5	AT5G50330	Protein kinase superfamily protein
gma-u.5	100813009	uncharacterized protein slr0889
gma-u.5	100797467	aarF domain-containing kinase 1
bra-r.6	103848789	uncharacterized protein slr0889
bra-r.6	103834892	aarF domain-containing protein kinase 1
vvi-u.5	100253088	uncharacterized LOC100253088
ppo-u.5	7463099	uncharacterized LOC7463099
mtr-u.5	11415643	uncharacterized protein slr0889
ghi-r.1	107931471	aarF domain-containing protein kinase 1
ghi-r.1	121203474	uncharacterized protein slr0889
ghi-r.1	121206455	aarF domain-containing protein kinase 1
bna-r.1	106427422	aarF domain-containing protein kinase 1
bna-r.1	106411453	uncharacterized protein slr0889-like
bna-r.1	106383141	uncharacterized protein slr0889-like
cit-r.1	102622057	uncharacterized LOC102622057
osa-u.5	4325018	uncharacterized LOC4325018
zma-u.5	100281096	protein kinase
zma-u.5	100272650	uncharacterized LOC100272650
tae-r.2	100682518	uncharacterized protein slr0889
tae-r.2	123062813	uncharacterized protein slr0889
tae-r.2	123071657	uncharacterized protein slr0889
hvu-r.1	123445022	aarF domain-containing protein kinase 1-like
sbi-r.1	8078693	uncharacterized protein slr0889
bdi-r.1	100823448	uncharacterized protein slr0889
cre-r.1	CHLRE_06g307100v5	uncharacterized protein

Top 50 coexpressed genes to 107819412 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107819412 (nta-r.1 coexpression data)

CoexMap"107819412"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(2075 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(2143 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3859 genes)	IEA

Protein

XP_016501005.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 1, cysk 1, cysk_nucl 1

(predict for XP_016501005.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016501005.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107819412	nta-r.1 for 107809208	nta-r.1 for 107773526	nta-r.1 for 107807155	sly-u.5 for 101267906	sly-u.5 for 101245047	sot-r.1 for 102594574	sot-r.1 for 102599807	ath-u.5 for AT4G24810	ath-u.5 for AT5G50330	gma-u.5 for 100813009	gma-u.5 for 100797467	bra-r.6 for 103848789	bra-r.6 for 103834892	vvi-u.5 for 100253088	ppo-u.5 for 7463099	mtr-u.5 for 11415643	ghi-r.1 for 107931471	ghi-r.1 for 121203474	ghi-r.1 for 121206455	bna-r.1 for 106427422	bna-r.1 for 106411453	bna-r.1 for 106383141	cit-r.1 for 102622057	osa-u.5 for 4325018	zma-u.5 for 100281096	zma-u.5 for 100272650	tae-r.2 for 100682518	tae-r.2 for 123062813	tae-r.2 for 123071657	hvu-r.1 for 123445022	sbi-r.1 for 8078693	bdi-r.1 for 100823448	cre-r.1 for CHLRE_06g307100v5

Ortholog

Ortholog ID: 6054

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107819412

uncharacterized LOC107773526

uncharacterized LOC107807155

uncharacterized LOC101267906

uncharacterized LOC101245047

uncharacterized protein slr0889-like

Protein kinase superfamily protein

uncharacterized protein slr0889

aarF domain-containing kinase 1

uncharacterized protein slr0889

aarF domain-containing protein kinase 1

uncharacterized LOC100253088

uncharacterized LOC7463099

uncharacterized protein slr0889

aarF domain-containing protein kinase 1

uncharacterized protein slr0889

aarF domain-containing protein kinase 1

uncharacterized protein slr0889-like

uncharacterized LOC102622057

uncharacterized LOC4325018

protein kinase

uncharacterized LOC100272650

uncharacterized protein slr0889

aarF domain-containing protein kinase 1-like

uncharacterized protein slr0889

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00860	Porphyrin metabolism	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	4
ath00790	Folate biosynthesis	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04517	IgSF CAM signaling	2
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	2
bra00195	Photosynthesis	2
bra00020	Citrate cycle (TCA cycle)	2
bra00270	Cysteine and methionine metabolism	2
bra00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr03010	Ribosome	4
mtr00710	Carbon fixation by Calvin cycle	2
mtr01230	Biosynthesis of amino acids	2
mtr00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00450	Selenocompound metabolism	2
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04517	IgSF CAM signaling	2
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00450	Selenocompound metabolism	2
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	7
bna00630	Glyoxylate and dicarboxylate metabolism	7
bna00670	One carbon pool by folate	7
bna00785	Lipoic acid metabolism	7
bna01200	Carbon metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2
bna00030	Pentose phosphate pathway	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00250	Alanine, aspartate and glutamate metabolism	2
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma01240	Biosynthesis of cofactors	2
zma00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	3
tae00052	Galactose metabolism	2
tae00511	Other glycan degradation	2
tae00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	4
tae03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00920	Sulfur metabolism	2
bdi01200	Carbon metabolism	2
bdi00230	Purine metabolism	2
bdi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	6
cre00620	Pyruvate metabolism	5
cre01200	Carbon metabolism	5
cre00061	Fatty acid biosynthesis	5
cre01212	Fatty acid metabolism	5

Expression

Expression pattern

Entrez Gene ID^*

107819412

107773526

107807155

101267906

101245047

102594574

102599807

828584

835099

100813009

100797467

103848789

103834892

100253088

7463099

11415643

107931471

121203474

121206455

106427422

106411453

106383141

102622057

4325018

100281096

100272650

100682518

123062813

123071657

123445022

8078693

100823448

5716865

The preparation time of this page was 0.1 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	2	2	2	1	1	1	3	3	1	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107819412 (nta-r.1 coexpression data)

Top 50 enrichment test to 107819412 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**