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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107828979   trehalose-phosphate phosphatase A 
 sly-u.5   101247646   probable trehalose-phosphate phosphatase F 
 sly-u.5   101255111   probable trehalose-phosphate phosphatase F 
 sly-u.5   101246803   trehalose-phosphate phosphatase A 
 ath-u.5   TPPF   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 ath-u.5   TPPG   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 ath-u.5   ATTPPA   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 gma-u.5   100775207   trehalose-phosphate phosphatase A 
 gma-u.5   100783008   trehalose-phosphate phosphatase A 
 gma-u.5   100819495   trehalose-phosphate phosphatase A 
 vvi-u.5   100254004   probable trehalose-phosphate phosphatase F 
 vvi-u.5   100251837   uncharacterized LOC100251837 
 ppo-u.5   7453982   trehalose-phosphate phosphatase A 
 ppo-u.5   7465524   probable trehalose-phosphate phosphatase F 
 ppo-u.5   18093987   probable trehalose-phosphate phosphatase F 
 mtr-u.5   11407921   probable trehalose-phosphate phosphatase G 
 mtr-u.5   11410522   probable trehalose-phosphate phosphatase F 
 mtr-u.5   25491860   trehalose-phosphate phosphatase A 
 osa-u.5   4349333   probable trehalose-phosphate phosphatase 2 
 osa-u.5   4330221   probable trehalose-phosphate phosphatase 1 
 zma-u.5   100285860   trehalose-phosphate phosphatase 
 zma-u.5   100216724   uncharacterized LOC100216724 

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Top 50 coexpressed genes to 107828979 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107828979 (nta-r.1 coexpression data)

CoexMap"107828979"


ntaLOC107828979 | Entrez gene ID : 107828979      
Species nta sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae bna
Paralog 1 3 3 3 2 3 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00500 [list] [network] Starch and sucrose metabolism (286 genes)
GO BP
GO:0005992 [list] [network] trehalose biosynthetic process  (36 genes)  IEA  
GO CC
GO MF
GO:0004805 [list] [network] trehalose-phosphatase activity  (36 genes)  IEA  
Protein XP_016511867.2 [sequence] [blastp]
XP_016511868.2 [sequence] [blastp]
XP_016511869.2 [sequence] [blastp]
XP_016511870.2 [sequence] [blastp]
XP_016511871.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_016511867.2)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_016511868.2)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_016511869.2)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_016511870.2)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_016511871.2)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_016511867.2)
chlo 5,  other 5  (predict for XP_016511868.2)
chlo 5,  other 5  (predict for XP_016511869.2)
chlo 5,  other 5  (predict for XP_016511870.2)
chlo 5,  other 5  (predict for XP_016511871.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107828979

.
sly-u.5
for
101247646

.
sly-u.5
for
101255111

.
sly-u.5
for
101246803

.
ath-u.5
for
TPPF

.
ath-u.5
for
TPPG

.
ath-u.5
for
ATTPPA

.
gma-u.5
for
100775207

.
gma-u.5
for
100783008

.
gma-u.5
for
100819495

.
vvi-u.5
for
100254004

.
vvi-u.5
for
100251837

.
ppo-u.5
for
7453982

.
ppo-u.5
for
7465524

.
ppo-u.5
for
18093987

.
mtr-u.5
for
11407921

.
mtr-u.5
for
11410522

.
mtr-u.5
for
25491860

.
osa-u.5
for
4349333

.
osa-u.5
for
4330221

.
zma-u.5
for
100285860

.
zma-u.5
for
100216724

.


Ortholog ID: 1987
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol ATTPPA TPPG LOC100819495 LOC100775207 LOC101246803 LOC101247646 LOC4349333 LOC100216724 LOC100285860 LOC103861317 LOC103852148 LOC100254004 LOC100251837 LOC7453982 LOC7465524 LOC11407921 LOC11410522 LOC123181612 LOC123145030 LOC123438401 LOC123404368 LOC107943939 LOC107886093 LOC111198494 LOC111198004 LOC110434966 LOC102602255 LOC102620821 LOC102628590 LOC100826238 LOC107793256 LOC107832745
Function* Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase 2 uncharacterized LOC100216724 trehalose-phosphate phosphatase probable trehalose-phosphate phosphatase G trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F uncharacterized LOC100251837 trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase G probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase 1 trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase 1 putative trehalose-phosphate phosphatase F putative trehalose-phosphate phosphatase F
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00480 Glutathione metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa01230 Biosynthesis of amino acids 3
osa00020 Citrate cycle (TCA cycle) 3
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 2
zma00330 Arginine and proline metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 10
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00360 Phenylalanine metabolism 3
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 5
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 2
vvi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 3
ppo00330 Arginine and proline metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae04626 Plant-pathogen interaction 4
tae00500 Starch and sucrose metabolism 4
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00360 Phenylalanine metabolism 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00500 Starch and sucrose metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 2
bdi01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835220 828355 100819495 100775207 101246803 101247646 4349333 100216724 100285860 103861317 103852148 100254004 100251837 7453982 7465524 11407921 11410522 123181612 123145030 123438401 123404368 107943939 107886093 111198494 111198004 110434966 102602255 102620821 102628590 100826238 107793256 107832745
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