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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107829376   uncharacterized LOC107829376 
 nta-r.1   107777250   uncharacterized LOC107777250 
 nta-r.1   107827183   uncharacterized LOC107827183 
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sot-r.1   102596962   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 bra-r.6   103841410   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107914253   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107897594   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 bna-r.1   106412116   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 bna-r.1   106439871   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 cit-r.1   102609583   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 

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Top 50 coexpressed genes to 107829376 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107829376 (nta-r.1 coexpression data)

CoexMap"107829376"


ntaLOC107829376 | Entrez gene ID : 107829376    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa bdi tae zma sbi hvu cre
Paralog 3 1 1 2 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016512333.2 [sequence] [blastp]
XP_016512339.2 [sequence] [blastp]
XP_016512346.2 [sequence] [blastp]
XP_016512351.2 [sequence] [blastp]
XP_016512358.2 [sequence] [blastp]
XP_075102318.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016512333.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016512339.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016512346.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016512351.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016512358.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_075102318.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_016512333.2)
chlo 5,  mito 3  (predict for XP_016512339.2)
chlo 5,  mito 3  (predict for XP_016512346.2)
chlo 5,  mito 3  (predict for XP_016512351.2)
chlo 5,  mito 3  (predict for XP_016512358.2)
chlo 5,  mito 3  (predict for XP_075102318.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107829376
nta-r.1
for
107777250
nta-r.1
for
107827183
sly-u.5
for
101252311
sot-r.1
for
102596962
ath-u.5
for
LOJ
ath-u.5
for
AT3G54980
gma-u.5
for
100777321
bra-r.6
for
103841410
vvi-u.5
for
100259391
ppo-u.5
for
7495762
mtr-u.5
for
11443262
ghi-r.1
for
107914253
ghi-r.1
for
107897594
bna-r.1
for
106412116
bna-r.1
for
106439871
cit-r.1
for
102609583


Ortholog ID: 12645
Species nta nta nta sly sot ath ath gma bra vvi ppo mtr ghi ghi bna bna cit
Symbol LOC107829376 LOC107777250 LOC107827183 LOC101252311 LOC102596962 LOJ AT3G54980 LOC100777321 LOC103841410 LOC100259391 LOC7495762 LOC11443262 LOC107914253 LOC107897594 LOC106412116 LOC106439871 LOC102609583
Function* uncharacterized LOC107829376 uncharacterized LOC107777250 uncharacterized LOC107827183 pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107829376 107777250 107827183 101252311 102596962 818508 824663 100777321 103841410 100259391 7495762 11443262 107914253 107897594 106412116 106439871 102609583
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