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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107830836   DExH-box ATP-dependent RNA helicase DExH9 
 nta-r.1   107801795   DExH-box ATP-dependent RNA helicase DExH10 
 nta-r.1   107812229   DExH-box ATP-dependent RNA helicase DExH10 
 nta-r.1   107799000   DExH-box ATP-dependent RNA helicase DExH10-like 
 sly-u.5   101261492   DExH-box ATP-dependent RNA helicase DExH10-like 
 sly-u.5   101257307   DExH-box ATP-dependent RNA helicase DExH9 
 sly-u.5   101262619   DExH-box ATP-dependent RNA helicase DExH10 
 sot-r.1   102587942   protein HUA ENHANCER 2-like 
 sot-r.1   102587109   protein HUA ENHANCER 2-like 
 sot-r.1   102605528   superkiller viralicidic activity 2-like 2 
 ath-u.5   HEN2   RNA helicase, ATP-dependent, SK12/DOB1 protein 
 ath-u.5   MTR4   RNA helicase, ATP-dependent, SK12/DOB1 protein 
 gma-u.5   100804792   DExH-box ATP-dependent RNA helicase DExH9 
 gma-u.5   100785694   DExH-box ATP-dependent RNA helicase DExH10 
 bra-r.6   103829199   DExH-box ATP-dependent RNA helicase DExH9 
 bra-r.6   103870525   DExH-box ATP-dependent RNA helicase DExH10 
 bra-r.6   103838580   DExH-box ATP-dependent RNA helicase DExH9 
 vvi-u.5   100246661   DExH-box ATP-dependent RNA helicase DExH10 
 vvi-u.5   100258243   DExH-box ATP-dependent RNA helicase DExH9 
 ppo-u.5   7485515   DExH-box ATP-dependent RNA helicase DExH10 
 ppo-u.5   18098364   DExH-box ATP-dependent RNA helicase DExH9 
 mtr-u.5   11442551   DExH-box ATP-dependent RNA helicase DExH9 
 mtr-u.5   11442176   DExH-box ATP-dependent RNA helicase DExH10 
 mtr-u.5   11408570   DExH-box ATP-dependent RNA helicase DExH10 
 ghi-r.1   107899861   DExH-box ATP-dependent RNA helicase DExH9 
 ghi-r.1   107961953   DExH-box ATP-dependent RNA helicase DExH9 
 ghi-r.1   107893491   DExH-box ATP-dependent RNA helicase DExH10 
 bna-r.1   111197833   DExH-box ATP-dependent RNA helicase DExH10 
 bna-r.1   106418603   DExH-box ATP-dependent RNA helicase DExH9 
 bna-r.1   106452760   DExH-box ATP-dependent RNA helicase DExH10 
 cit-r.1   102611776   DExH-box ATP-dependent RNA helicase DExH10 
 cit-r.1   102621716   DExH-box ATP-dependent RNA helicase DExH9 
 osa-u.5   9268439   DExH-box ATP-dependent RNA helicase DExH9 
 osa-u.5   4349924   DExH-box ATP-dependent RNA helicase DExH10 
 zma-u.5   103634889   DExH-box ATP-dependent RNA helicase DExH10 
 zma-u.5   103638180   DExH-box ATP-dependent RNA helicase DExH9 
 tae-r.2   123044089   DExH-box ATP-dependent RNA helicase DExH10 
 tae-r.2   123091275   DExH-box ATP-dependent RNA helicase DExH10 
 tae-r.2   123051960   DExH-box ATP-dependent RNA helicase DExH10 
 hvu-r.1   123425158   DExH-box ATP-dependent RNA helicase DExH10-like 
 hvu-r.1   123412777   DExH-box ATP-dependent RNA helicase DExH9 
 hvu-r.1   123447952   DExH-box ATP-dependent RNA helicase DExH10-like 
 sbi-r.1   8067882   DExH-box ATP-dependent RNA helicase DExH9 
 sbi-r.1   8078772   DExH-box ATP-dependent RNA helicase DExH10 
 bdi-r.1   100834961   DExH-box ATP-dependent RNA helicase DExH10 
 bdi-r.1   100822667   DExH-box ATP-dependent RNA helicase DExH9 
 cre-r.1   CHLRE_06g289950v5   uncharacterized protein 
 cre-r.1   CHLRE_02g117900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107830836 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107830836 (nta-r.1 coexpression data)

CoexMap"107830836"


ntaLOC107830836 | Entrez gene ID : 107830836      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 2 3 2 2 3 3 3 2 2 2 3 3 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03018 [list] [network] RNA degradation (211 genes)
GO BP
GO:0000460 [list] [network] maturation of 5.8S rRNA  (61 genes)  IEA  
GO:0006401 [list] [network] RNA catabolic process  (172 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (126 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016513986.2 [sequence] [blastp]
XP_016513987.2 [sequence] [blastp]
XP_075073638.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for XP_016513986.2)
nucl 5,  cyto 2,  chlo 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for XP_016513987.2)
nucl 5,  cyto 2,  chlo 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for XP_075073638.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016513986.2)
other 7  (predict for XP_016513987.2)
other 7  (predict for XP_075073638.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107830836
nta-r.1
for
107801795
nta-r.1
for
107812229
nta-r.1
for
107799000
sly-u.5
for
101261492
sly-u.5
for
101257307
sly-u.5
for
101262619
sot-r.1
for
102587942
sot-r.1
for
102587109
sot-r.1
for
102605528
ath-u.5
for
HEN2
ath-u.5
for
MTR4
gma-u.5
for
100804792
gma-u.5
for
100785694
bra-r.6
for
103829199
bra-r.6
for
103870525
bra-r.6
for
103838580
vvi-u.5
for
100246661
vvi-u.5
for
100258243
ppo-u.5
for
7485515
ppo-u.5
for
18098364
mtr-u.5
for
11442551
mtr-u.5
for
11442176
mtr-u.5
for
11408570
ghi-r.1
for
107899861
ghi-r.1
for
107961953
ghi-r.1
for
107893491
bna-r.1
for
111197833
bna-r.1
for
106418603
bna-r.1
for
106452760
cit-r.1
for
102611776
cit-r.1
for
102621716
osa-u.5
for
9268439
osa-u.5
for
4349924
zma-u.5
for
103634889
zma-u.5
for
103638180
tae-r.2
for
123044089
tae-r.2
for
123091275
tae-r.2
for
123051960
hvu-r.1
for
123425158
hvu-r.1
for
123412777
hvu-r.1
for
123447952
sbi-r.1
for
8067882
sbi-r.1
for
8078772
bdi-r.1
for
100834961
bdi-r.1
for
100822667
cre-r.1
for
CHLRE_06g289950v5
cre-r.1
for
CHLRE_02g117900v5


Ortholog ID: 2529
Species nta nta nta sly sly sly sot sot sot ath ath gma gma bra bra bra vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC107830836 LOC107766793 LOC107800695 LOC101261492 LOC101257307 LOC101262619 LOC102587942 LOC102587109 LOC102605528 HEN2 MTR4 LOC100804792 LOC100785694 LOC103829199 LOC103870525 LOC103838580 LOC100246661 LOC100258243 LOC7485515 LOC18098364 LOC11442551 LOC11442176 LOC11408570 LOC107899861 LOC107961953 LOC107888367 LOC111197833 LOC106452760 LOC106434706 LOC102611776 LOC102621716 LOC9268439 LOC4349924 LOC103634889 LOC103638180 LOC123091275 LOC123086655 LOC123187841 LOC123425158 LOC123412777 LOC123447952 LOC8067882 LOC8078772 LOC100834961 LOC100822667 CHLRE_06g289950v5 CHLRE_02g117900v5
Function* DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH9-like DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10-like DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 protein HUA ENHANCER 2-like protein HUA ENHANCER 2-like superkiller viralicidic activity 2-like 2 RNA helicase, ATP-dependent, SK12/DOB1 protein RNA helicase, ATP-dependent, SK12/DOB1 protein DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10-like DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10-like DExH-box ATP-dependent RNA helicase DExH9 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH10 DExH-box ATP-dependent RNA helicase DExH9 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03018 RNA degradation 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03040 Spliceosome 3
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03008 Ribosome biogenesis in eukaryotes 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03420 Nucleotide excision repair 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 5
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma00310 Lysine degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03082 ATP-dependent chromatin remodeling 3
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03013 Nucleocytoplasmic transport 2
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 3
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107830836 107766793 107800695 101261492 101257307 101262619 102587942 102587109 102605528 815269 842269 100804792 100785694 103829199 103870525 103838580 100246661 100258243 7485515 18098364 11442551 11442176 11408570 107899861 107961953 107888367 111197833 106452760 106434706 102611776 102621716 9268439 4349924 103634889 103638180 123091275 123086655 123187841 123425158 123412777 123447952 8067882 8078772 100834961 100822667 5721076 5727993
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