ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107886062	uncharacterized LOC107886062
ghi-r.1	121211126	uncharacterized LOC121211126
ath-u.5	AT5G47400	sphingomyelin phosphodiesterase
bra-r.6	103827862	uncharacterized LOC103827862
bna-r.1	106397619	uncharacterized LOC106397619
bna-r.1	106411176	uncharacterized LOC106411176
cit-r.1	102620820	uncharacterized LOC102620820
gma-u.5	100801649	uncharacterized LOC100801649
gma-u.5	100778532	uncharacterized LOC100778532
vvi-u.5	100251036	uncharacterized LOC100251036
ppo-u.5	18094600	uncharacterized LOC18094600
mtr-u.5	11415479	uncharacterized LOC11415479
sly-u.5	101260751	uncharacterized LOC101260751
sot-r.1	102588056	uncharacterized LOC102588056
nta-r.1	107766971	uncharacterized LOC107766971
nta-r.1	107829165	uncharacterized LOC107829165
osa-u.5	107279230	uncharacterized LOC107279230
zma-u.5	100279889	uncharacterized LOC100279889
tae-r.2	123090380	uncharacterized LOC123090380
tae-r.2	123099156	uncharacterized LOC123099156
tae-r.2	123106120	uncharacterized LOC123106120
hvu-r.1	123450002	uncharacterized LOC123450002
hvu-r.1	123450912	uncharacterized LOC123450912
sbi-r.1	8081563	uncharacterized LOC8081563
bdi-r.1	100843100	uncharacterized LOC100843100
cre-r.1	CHLRE_06g278126v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0050290 [list] [network] sphingomyelin phosphodiesterase D activity

(2 genes)

IEA

Protein

XP_016665357.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_016665357.2)

Subcellular
localization
TargetP

other 4

(predict for XP_016665357.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107886062	ghi-r.1 for 121211126	ath-u.5 for AT5G47400	bra-r.6 for 103827862	bna-r.1 for 106397619	bna-r.1 for 106411176	cit-r.1 for 102620820	gma-u.5 for 100801649	gma-u.5 for 100778532	vvi-u.5 for 100251036	ppo-u.5 for 18094600	mtr-u.5 for 11415479	sly-u.5 for 101260751	sot-r.1 for 102588056	nta-r.1 for 107766971	nta-r.1 for 107829165	osa-u.5 for 107279230	zma-u.5 for 100279889	tae-r.2 for 123090380	tae-r.2 for 123099156	tae-r.2 for 123106120	hvu-r.1 for 123450002	hvu-r.1 for 123450912	sbi-r.1 for 8081563	bdi-r.1 for 100843100	cre-r.1 for CHLRE_06g278126v5

Ortholog

Ortholog ID: 7753

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107886062

uncharacterized LOC121211126

sphingomyelin phosphodiesterase

uncharacterized LOC103827862

uncharacterized LOC106397619

uncharacterized LOC106411176

uncharacterized LOC102620820

uncharacterized LOC100801649

uncharacterized LOC100778532

uncharacterized LOC100251036

uncharacterized LOC18094600

uncharacterized LOC11415479

uncharacterized LOC101260751

uncharacterized LOC102588056

uncharacterized LOC107766971

uncharacterized LOC107829165

uncharacterized LOC107279230

uncharacterized LOC100279889

uncharacterized LOC123099156

uncharacterized LOC123106120

uncharacterized LOC123450002

uncharacterized LOC123450912

uncharacterized LOC8081563

uncharacterized LOC100843100

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3
bra00941	Flavonoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	4
bna04626	Plant-pathogen interaction	4
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03008	Ribosome biogenesis in eukaryotes	4
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	5
cit04144	Endocytosis	4
cit03040	Spliceosome	4
cit00500	Starch and sucrose metabolism	2
cit00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	3
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	3
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	2
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3

Expression

Expression pattern

Entrez Gene ID^*

107886062

121211126

834787

103827862

106397619

106411176

102620820

100801649

100778532

100251036

18094600

11415479

101260751

102588056

107766971

107829165

107279230

100279889

123099156

123106120

123450002

123450912

8081563

100843100

66053683

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107886062 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886062 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	2	1	1	1	1	1	2	1	1	3	2	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107886062 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886062 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**