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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107886467   DNA polymerase epsilon subunit C 
 ghi-r.1   107909838   DNA polymerase epsilon subunit C 
 ath-u.5   NF-YC13   nuclear factor Y, subunit C13 
 bra-r.6   103827983   nuclear transcription factor Y subunit C-5 
 bna-r.1   106352495   nuclear transcription factor Y subunit C-5 
 bna-r.1   106356523   nuclear transcription factor Y subunit C-5-like 
 gma-u.5   DPB3-2   dr1-associated corepressor-like 
 mtr-u.5   11441062   DNA polymerase epsilon subunit C 
 sly-u.5   101265544   uncharacterized LOC101265544 
 nta-r.1   107784093   uncharacterized LOC107784093 
 nta-r.1   107786176   uncharacterized LOC107786176 
 zma-u.5   101027179   histone-like transcription factor and archaeal histone family protein 
 tae-r.2   123077497   nuclear transcription factor Y subunit C-6 
 tae-r.2   123065022   nuclear transcription factor Y subunit C-6 
 tae-r.2   123060426   nuclear transcription factor Y subunit C-6 
 hvu-r.1   123442951   nucleolin 
 bdi-r.1   100830304   translation initiation factor IF-2 
 cre-r.1   CHLRE_03g193900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107886467 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886467 (ghi-r.1 coexpression data)

CoexMap"107886467"


ghiLOC107886467 | Entrez gene ID : 107886467    
Species ghi ath bra bna gma mtr sly nta zma tae hvu bdi cre vvi sot osa ppo sbi cit
Paralog 2 1 1 2 1 1 1 2 1 3 1 1 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (254 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (1027 genes)  IEA  
Protein XP_016665920.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016665920.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016665920.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107886467
ghi-r.1
for
107909838
ath-u.5
for
NF-YC13
bra-r.6
for
103827983
bna-r.1
for
106352495
bna-r.1
for
106356523
gma-u.5
for
DPB3-2
mtr-u.5
for
11441062
sly-u.5
for
101265544
nta-r.1
for
107784093
nta-r.1
for
107786176
zma-u.5
for
101027179
tae-r.2
for
123077497
tae-r.2
for
123065022
tae-r.2
for
123060426
hvu-r.1
for
123442951
bdi-r.1
for
100830304
cre-r.1
for
CHLRE_03g193900v5


Ortholog ID: 10977
Species ghi ghi ath bra bna bna gma mtr sly nta nta zma tae tae tae hvu bdi cre
Symbol LOC107886467 LOC107909838 NF-YC13 LOC103827983 LOC106352495 LOC106356523 DPB3-2 LOC11441062 LOC101265544 LOC107784093 LOC107786176 LOC101027179 LOC123077497 LOC123065022 LOC123060426 LOC123442951 LOC100830304 CHLRE_03g193900v5
Function* DNA polymerase epsilon subunit C DNA polymerase epsilon subunit C nuclear factor Y, subunit C13 nuclear transcription factor Y subunit C-5 nuclear transcription factor Y subunit C-5 nuclear transcription factor Y subunit C-5-like dr1-associated corepressor-like DNA polymerase epsilon subunit C uncharacterized LOC101265544 uncharacterized LOC107784093 uncharacterized LOC107786176 histone-like transcription factor and archaeal histone family protein nuclear transcription factor Y subunit C-6 nuclear transcription factor Y subunit C-6 nuclear transcription factor Y subunit C-6 nucleolin translation initiation factor IF-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03430 Mismatch repair 5
ath03420 Nucleotide excision repair 4
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03060 Protein export 3
mtr04145 Phagosome 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03430 Mismatch repair 2
sly03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
nta03460 Fanconi anemia pathway 3
nta03440 Homologous recombination 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03020 RNA polymerase 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03030 DNA replication 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107886467 107909838 834343 103827983 106352495 106356523 100793004 11441062 101265544 107784093 107786176 101027179 123077497 123065022 123060426 123442951 100830304 5718711
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