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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888406   synaptotagmin-4 
 ath-u.5   SYTD   Calcium-dependent lipid-binding (CaLB domain) family protein 
 ath-u.5   NTMC2T2.1   Calcium-dependent lipid-binding (CaLB domain) family protein 
 gma-u.5   100787972   synaptotagmin-4 
 gma-u.5   100797374   synaptotagmin-5 
 vvi-u.5   100247088   synaptotagmin-5 
 ppo-u.5   18099915   synaptotagmin-5 
 ppo-u.5   7458382   synaptotagmin-4 
 ppo-u.5   18111082   synaptotagmin-5 
 mtr-u.5   11441678   synaptotagmin-5 
 sly-u.5   101262491   synaptotagmin-5-like 
 sly-u.5   101245625   synaptotagmin-5-like 
 sly-u.5   101262022   synaptotagmin-5 
 osa-u.5   4337191   synaptotagmin-5 
 osa-u.5   4345217   synaptotagmin-5 
 zma-u.5   100191632   lipid binding protein 
 zma-u.5   103645856   synaptotagmin-5 

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Top 50 coexpressed genes to 107888406 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888406 (ghi-r.1 coexpression data)

CoexMap"107888406"


ghiLOC107888406 | Entrez gene ID : 107888406    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 2 1 3 1 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1428 genes)  IEA  
GO MF
GO:0008289 [list] [network] lipid binding  (793 genes)  IEA  
Protein XP_040965257.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for XP_040965257.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_040965257.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888406
ath-u.5
for
SYTD
ath-u.5
for
NTMC2T2.1
gma-u.5
for
100787972
gma-u.5
for
100797374
vvi-u.5
for
100247088
ppo-u.5
for
18099915
ppo-u.5
for
7458382
ppo-u.5
for
18111082
mtr-u.5
for
11441678
sly-u.5
for
101262491
sly-u.5
for
101245625
sly-u.5
for
101262022
osa-u.5
for
4337191
osa-u.5
for
4345217
zma-u.5
for
100191632
zma-u.5
for
103645856


Ortholog ID: 2931
Species ghi ghi ath ath bra bra bna cit gma gma vvi ppo ppo mtr sly sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107912465 LOC107888406 SYTD NTMC2T2.1 LOC103850753 LOC103844120 LOC111214081 LOC102615706 LOC100787972 LOC100797374 LOC100247088 LOC7458382 LOC18111082 LOC11441678 LOC101264538 LOC101262491 LOC102605806 LOC107821108 LOC107815235 LOC4337191 LOC4345217 LOC100191632 LOC103645856 LOC123190800 LOC123054947 LOC123428168 LOC123401085 LOC8068476 LOC8073091 LOC100823592 LOC100829765
Function* synaptotagmin-5 synaptotagmin-4 Calcium-dependent lipid-binding (CaLB domain) family protein Calcium-dependent lipid-binding (CaLB domain) family protein synaptotagmin-4 synaptotagmin-5 synaptotagmin-5 synaptotagmin-5 synaptotagmin-4 synaptotagmin-5 synaptotagmin-5 synaptotagmin-4 synaptotagmin-5 synaptotagmin-5 synaptotagmin-5-like synaptotagmin-5-like synaptotagmin-5-like synaptotagmin-5-like synaptotagmin-5 synaptotagmin-5 synaptotagmin-5 lipid binding protein synaptotagmin-5 synaptotagmin-5 synaptotagmin-5 synaptotagmin-5-like synaptotagmin-5-like synaptotagmin-5 synaptotagmin-5 synaptotagmin-5 synaptotagmin-5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 3
ghi04075 Plant hormone signal transduction 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
ath04145 Phagosome 9
ath04142 Lysosome 4
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04130 SNARE interactions in vesicular transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 4
osa00600 Sphingolipid metabolism 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
zma04145 Phagosome 6
zma00511 Other glycan degradation 3
zma00600 Sphingolipid metabolism 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03015 mRNA surveillance pathway 2
zma04120 Ubiquitin mediated proteolysis 2
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 3
hvu01200 Carbon metabolism 3
hvu00030 Pentose phosphate pathway 2
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi00020 Citrate cycle (TCA cycle) 4
sbi01200 Carbon metabolism 4
sbi01210 2-Oxocarboxylic acid metabolism 3
sbi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
bdi00020 Citrate cycle (TCA cycle) 3
bdi01200 Carbon metabolism 3
bdi00270 Cysteine and methionine metabolism 2
bdi00566 Sulfoquinovose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107912465 107888406 830978 837052 103850753 103844120 111214081 102615706 100787972 100797374 100247088 7458382 18111082 11441678 101264538 101262491 102605806 107821108 107815235 4337191 4345217 100191632 103645856 123190800 123054947 123428168 123401085 8068476 8073091 100823592 100829765
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