Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888682   protein translocase subunit SecA 
 ath-u.5   AT3G04950   SEC-C motif protein 
 gma-u.5   100792311   uncharacterized LOC100792311 
 gma-u.5   100791282   protein translocase subunit SecA 1-like 
 vvi-u.5   100260646   uncharacterized LOC100260646 
 ppo-u.5   18110964   uncharacterized LOC18110964 
 mtr-u.5   11433325   uncharacterized LOC11433325 
 sly-u.5   101253444   uncharacterized LOC101253444 
 osa-u.5   4340814   uncharacterized LOC4340814 
 zma-u.5   100275732   uncharacterized LOC100275732 

close


Top 50 coexpressed genes to 107888682 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107888682 (ghi-r.1 coexpression data)

CoexMap"107888682"


ghiLOC107888682 | Entrez gene ID : 107888682    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040937639.1 [sequence] [blastp]
XP_040937640.1 [sequence] [blastp]
XP_040937641.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1  (predict for XP_040937639.1)
nucl 6,  cyto_nucl 4,  chlo 1,  plas 1  (predict for XP_040937640.1)
chlo 4,  nucl 3,  chlo_mito 3  (predict for XP_040937641.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_040937639.1)
mito 3  (predict for XP_040937640.1)
mito 5  (predict for XP_040937641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888682
ath-u.5
for
AT3G04950
gma-u.5
for
100792311
gma-u.5
for
100791282
vvi-u.5
for
100260646
ppo-u.5
for
18110964
mtr-u.5
for
11433325
sly-u.5
for
101253444
osa-u.5
for
4340814
zma-u.5
for
100275732


Ortholog ID: 9448
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107899417 LOC107888682 AT3G04950 LOC103859072 LOC106388819 LOC106439005 LOC102620331 LOC100791282 LOC100792311 LOC100260646 LOC18110964 LOC11433325 LOC101253444 LOC102594209 LOC107783101 LOC107804355 LOC4340814 LOC100275732 LOC123168867 LOC123150457 LOC123407606 LOC8072814 LOC100823040
Function* uncharacterized LOC107899417 protein translocase subunit SecA SEC-C motif protein protein translocase subunit SecA protein translocase subunit SecA protein translocase subunit SecA-like uncharacterized LOC102620331 protein translocase subunit SecA 1-like uncharacterized LOC100792311 uncharacterized LOC100260646 uncharacterized LOC18110964 uncharacterized LOC11433325 uncharacterized LOC101253444 uncharacterized LOC102594209 uncharacterized LOC107783101 uncharacterized LOC107804355 uncharacterized LOC4340814 uncharacterized LOC100275732 uncharacterized LOC123168867 uncharacterized LOC123150457 uncharacterized LOC123407606 protein translocase subunit SecA protein translocase subunit SecA
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03015 mRNA surveillance pathway 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03018 RNA degradation 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu01240 Biosynthesis of cofactors 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 3
sbi00270 Cysteine and methionine metabolism 3
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03018 RNA degradation 2
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107899417 107888682 819655 103859072 106388819 106439005 102620331 100791282 100792311 100260646 18110964 11433325 101253444 102594209 107783101 107804355 4340814 100275732 123168867 123150457 123407606 8072814 100823040
The preparation time of this page was 0.3 [sec].