ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107960365	uncharacterized protein C1420.01c
ghi-r.1	121229615	probable WRKY transcription factor protein 1
ath-u.5	AT5G39380	Plant calmodulin-binding protein-like protein
bra-r.6	103863835	protein IWS1 homolog A
bna-r.1	106426527	protein IWS1 homolog A
bna-r.1	106445955	protein IWS1 homolog A
cit-r.1	102619126	uncharacterized LOC102619126
gma-u.5	100797757	uncharacterized LOC100797757
gma-u.5	100794073	cell wall protein RBR3
vvi-u.5	104882300	uncharacterized LOC104882300
vvi-u.5	104881704	uncharacterized LOC104881704
ppo-u.5	7484559	uncharacterized LOC7484559
mtr-u.5	25495325	uncharacterized LOC25495325
sly-u.5	101266085	uncharacterized LOC101266085
sot-r.1	102593716	uncharacterized LOC102593716
nta-r.1	107814701	uncharacterized LOC107814701
nta-r.1	107777866	uncharacterized LOC107777866
osa-u.5	4332030	uncharacterized LOC4332030
zma-u.5	103639446	Plant calmodulin-binding protein-related
tae-r.2	123093010	uncharacterized LOC123093010
tae-r.2	123098290	uncharacterized LOC123098290
tae-r.2	123085041	uncharacterized LOC123085041
hvu-r.1	123449345	uncharacterized LOC123449345
sbi-r.1	8081844	uncharacterized LOC8081844
bdi-r.1	100840352	uncharacterized LOC100840352

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005516 [list] [network] calmodulin binding

(180 genes)

IEA

Protein

XP_016670176.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016670176.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_016670176.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107960365	ghi-r.1 for 121229615	ath-u.5 for AT5G39380	bra-r.6 for 103863835	bna-r.1 for 106426527	bna-r.1 for 106445955	cit-r.1 for 102619126	gma-u.5 for 100797757	gma-u.5 for 100794073	vvi-u.5 for 104882300	vvi-u.5 for 104881704	ppo-u.5 for 7484559	mtr-u.5 for 25495325	sly-u.5 for 101266085	sot-r.1 for 102593716	nta-r.1 for 107814701	nta-r.1 for 107777866	osa-u.5 for 4332030	zma-u.5 for 103639446	tae-r.2 for 123093010	tae-r.2 for 123098290	tae-r.2 for 123085041	hvu-r.1 for 123449345	sbi-r.1 for 8081844	bdi-r.1 for 100840352

Ortholog

Ortholog ID: 6663

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized protein C1420.01c

probable WRKY transcription factor protein 1

Plant calmodulin-binding protein-like protein

protein IWS1 homolog A

uncharacterized LOC102619126

uncharacterized LOC100797757

uncharacterized LOC100789388

uncharacterized LOC104882300

uncharacterized LOC104881704

uncharacterized LOC7484559

uncharacterized LOC25495325

uncharacterized LOC101266085

uncharacterized LOC102593716

uncharacterized LOC107814701

uncharacterized LOC107777866

uncharacterized LOC4332030

Plant calmodulin-binding protein-related

uncharacterized LOC123093010

uncharacterized LOC123098290

uncharacterized LOC123085041

uncharacterized LOC123449345

uncharacterized LOC8081844

uncharacterized LOC100840352

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4
bna00565	Ether lipid metabolism	2
bna04144	Endocytosis	2
bna00561	Glycerolipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4
bna04144	Endocytosis	4
bna00565	Ether lipid metabolism	2
bna00561	Glycerolipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00562	Inositol phosphate metabolism	2
zma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi01230	Biosynthesis of amino acids	2
sbi00260	Glycine, serine and threonine metabolism	2
sbi00630	Glyoxylate and dicarboxylate metabolism	2
sbi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00071	Fatty acid degradation	3
bdi01212	Fatty acid metabolism	3
bdi04146	Peroxisome	3
bdi00410	beta-Alanine metabolism	2
bdi00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107960365

121229615

833934

103863835

106426527

106445955

102619126

100797757

100789388

104882300

104881704

7484559

25495325

101266085

102593716

107814701

107777866

4332030

103639446

123093010

123098290

123085041

123449345

8081844

100840352

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107960365 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107960365 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	2	2	1	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107960365 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107960365 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**