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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890531   2,3-dimethylmalate lyase 
 ghi-r.1   121206296   2,3-dimethylmalate lyase 
 ghi-r.1   107919574   carboxyvinyl-carboxyphosphonate phosphorylmutase-like 
 ath-u.5   AT2G43180   Phosphoenolpyruvate carboxylase family protein 
 bra-r.6   103858053   2,3-dimethylmalate lyase 
 bna-r.1   106388308   2,3-dimethylmalate lyase 
 bna-r.1   125606864   2,3-dimethylmalate lyase-like 
 cit-r.1   102624317   uncharacterized LOC102624317 
 gma-u.5   100818553   ICL/PEPM domain-containing protein 
 gma-u.5   100806389   2,3-dimethylmalate lyase 
 vvi-u.5   100244697   uncharacterized LOC100244697 
 ppo-u.5   7466177   uncharacterized LOC7466177 
 mtr-u.5   11408481   2,3-dimethylmalate lyase 
 mtr-u.5   120576929   2,3-dimethylmalate lyase 
 sly-u.5   101247324   uncharacterized LOC101247324 
 sot-r.1   102580274   2,3-dimethylmalate lyase-like 
 nta-r.1   107765651   uncharacterized LOC107765651 
 nta-r.1   107809819   uncharacterized LOC107809819 
 osa-u.5   4336329   uncharacterized LOC4336329 
 osa-u.5   4335655   uncharacterized LOC4335655 
 zma-u.5   100277287   uncharacterized LOC100277287 
 zma-u.5   100194050   Phosphoenolpyruvate carboxylase family protein 
 tae-r.2   123045963   2,3-dimethylmalate lyase 
 tae-r.2   123053138   2,3-dimethylmalate lyase 
 tae-r.2   123053835   2,3-dimethylmalate lyase 
 hvu-r.1   123427183   2,3-dimethylmalate lyase-like 
 hvu-r.1   123426534   2,3-dimethylmalate lyase-like 
 sbi-r.1   8060218   2,3-dimethylmalate lyase 
 sbi-r.1   8070958   2,3-dimethylmalate lyase 
 bdi-r.1   100828754   2,3-dimethylmalate lyase 
 bdi-r.1   100833450   2,3-dimethylmalate lyase 
 cre-r.1   CHLRE_03g149250v5   uncharacterized protein 

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Top 50 coexpressed genes to 107890531 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890531 (ghi-r.1 coexpression data)

CoexMap"107890531"


ghiLOC107890531 | Entrez gene ID : 107890531    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 1 2 1 1 2 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003824 [list] [network] catalytic activity  (20761 genes)  IEA  
Protein XP_016670491.2 [sequence] [blastp]
XP_016670492.2 [sequence] [blastp]
XP_016670493.2 [sequence] [blastp]
XP_040957213.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_016670491.2)
chlo 8,  vacu 1  (predict for XP_016670492.2)
chlo 8,  vacu 1  (predict for XP_016670493.2)
chlo 8,  vacu 1  (predict for XP_040957213.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016670491.2)
chlo 9  (predict for XP_016670492.2)
chlo 9  (predict for XP_016670493.2)
chlo 9  (predict for XP_040957213.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890531
ghi-r.1
for
121206296
ghi-r.1
for
107919574
ath-u.5
for
AT2G43180
bra-r.6
for
103858053
bna-r.1
for
106388308
bna-r.1
for
125606864
cit-r.1
for
102624317
gma-u.5
for
100818553
gma-u.5
for
100806389
vvi-u.5
for
100244697
ppo-u.5
for
7466177
mtr-u.5
for
11408481
mtr-u.5
for
120576929
sly-u.5
for
101247324
sot-r.1
for
102580274
nta-r.1
for
107765651
nta-r.1
for
107809819
osa-u.5
for
4336329
osa-u.5
for
4335655
zma-u.5
for
100277287
zma-u.5
for
100194050
tae-r.2
for
123045963
tae-r.2
for
123053138
tae-r.2
for
123053835
hvu-r.1
for
123427183
hvu-r.1
for
123426534
sbi-r.1
for
8060218
sbi-r.1
for
8070958
bdi-r.1
for
100828754
bdi-r.1
for
100833450
cre-r.1
for
CHLRE_03g149250v5


Ortholog ID: 5974
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107890531 LOC121206296 LOC107919574 AT2G43180 LOC103858053 LOC106388308 LOC125606864 LOC102624317 LOC100818553 LOC100806389 LOC100244697 LOC7466177 LOC11408481 LOC120576929 LOC101247324 LOC102580274 LOC107765651 LOC107809819 LOC4336329 LOC4335655 LOC100277287 LOC100194050 LOC123045963 LOC123053835 LOC123189049 LOC123427183 LOC123426534 LOC8060218 LOC8070958 LOC100828754 LOC100833450 CHLRE_03g149250v5
Function* 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase carboxyvinyl-carboxyphosphonate phosphorylmutase-like Phosphoenolpyruvate carboxylase family protein 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase-like uncharacterized LOC102624317 ICL/PEPM domain-containing protein 2,3-dimethylmalate lyase uncharacterized LOC100244697 uncharacterized LOC7466177 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase uncharacterized LOC101247324 2,3-dimethylmalate lyase-like uncharacterized LOC107765651 uncharacterized LOC107809819 uncharacterized LOC4336329 uncharacterized LOC4335655 uncharacterized LOC100277287 Phosphoenolpyruvate carboxylase family protein 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase-like 2,3-dimethylmalate lyase-like 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00460 Cyanoamino acid metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00300 Lysine biosynthesis 2
gma00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00561 Glycerolipid metabolism 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr03013 Nucleocytoplasmic transport 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 3
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00500 Starch and sucrose metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 9
osa00340 Histidine metabolism 2
osa00300 Lysine biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
zma04146 Peroxisome 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 6
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 3
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00620 Pyruvate metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03083 Polycomb repressive complex 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107890531 121206296 107919574 818919 103858053 106388308 125606864 102624317 100818553 100806389 100244697 7466177 11408481 120576929 101247324 102580274 107765651 107809819 4336329 4335655 100277287 100194050 123045963 123053835 123189049 123427183 123426534 8060218 8070958 100828754 100833450 5721172
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