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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891044   RING-H2 finger protein ATL33 
 ghi-r.1   107948879   RING-H2 finger protein ATL33 
 ghi-r.1   107899302   RING-H2 finger protein ATL33 
 ghi-r.1   107889697   RING-H2 finger protein ATL33 
 ath-u.5   AT2G37580   RING/U-box superfamily protein 
 bra-r.6   103865988   RING-H2 finger protein ATL33-like 
 bra-r.6   103865609   RING-H2 finger protein ATL33 
 bra-r.6   103857720   RING-H2 finger protein ATL33 
 bna-r.1   106427768   RING-H2 finger protein ATL33-like 
 gma-u.5   100810869   RING-H2 finger protein ATL33 
 vvi-u.5   100256289   RING-H2 finger protein ATL33 
 ppo-u.5   7493242   RING-H2 finger protein ATL33 
 mtr-u.5   25498439   RING-H2 finger protein ATL33 
 mtr-u.5   11414306   RING-H2 finger protein ATL33 
 sly-u.5   101256321   RING-H2 finger protein ATL33 
 sot-r.1   102580129   RING-H2 finger protein ATL33 
 nta-r.1   142166251   RING-H2 finger protein ATL33 

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Top 50 coexpressed genes to 107891044 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107891044 (ghi-r.1 coexpression data)

CoexMap"107891044"


ghiLOC107891044 | Entrez gene ID : 107891044    
Species ghi ath bra bna gma vvi ppo mtr sly sot nta hvu bdi osa tae zma cre sbi cit
Paralog 4 1 3 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
Protein XP_016671178.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 4,  vacu 1  (predict for XP_016671178.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016671178.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891044
ghi-r.1
for
107948879
ghi-r.1
for
107899302
ghi-r.1
for
107889697
ath-u.5
for
AT2G37580
bra-r.6
for
103865988
bra-r.6
for
103865609
bra-r.6
for
103857720
bna-r.1
for
106427768
gma-u.5
for
100810869
vvi-u.5
for
100256289
ppo-u.5
for
7493242
mtr-u.5
for
25498439
mtr-u.5
for
11414306
sly-u.5
for
101256321
sot-r.1
for
102580129
nta-r.1
for
142166251


Ortholog ID: 11666
Species ghi ghi ghi ath bra bra bra bna bna bna gma vvi ppo mtr mtr sly sot nta
Symbol LOC107891044 LOC107948879 LOC107889697 AT2G37580 LOC103865988 LOC103865609 LOC103857720 LOC106427768 LOC106392875 LOC106385168 LOC100810869 LOC100256289 LOC7493242 LOC25498439 LOC11414306 LOC101256321 LOC102580129 LOC142166251
Function* RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING/U-box superfamily protein RING-H2 finger protein ATL33-like RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33-like RING-H2 finger protein ATL33-like RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33 RING-H2 finger protein ATL33
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00270 Cysteine and methionine metabolism 3
ppo00670 One carbon pool by folate 3
ppo00040 Pentose and glucuronate interconversions 2
ppo00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00280 Valine, leucine and isoleucine degradation 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891044 107948879 107889697 818334 103865988 103865609 103857720 106427768 106392875 106385168 100810869 100256289 7493242 25498439 11414306 101256321 102580129 142166251
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