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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107896488   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 ath-u.5   AT4G11860   FAM63A-like protein (DUF544) 
 ath-u.5   AT4G22960   FAM63A-like protein (DUF544) 
 gma-u.5   100808340   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-u.5   100797239   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-u.5   121174625   uncharacterized LOC121174625 
 vvi-u.5   100263264   uncharacterized LOC100263264 
 ppo-u.5   7479246   uncharacterized LOC7479246 
 ppo-u.5   7490923   uncharacterized LOC7490923 
 mtr-u.5   11437518   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 sly-u.5   101249947   uncharacterized LOC101249947 
 osa-u.5   4342044   uncharacterized LOC4342044 
 zma-u.5   103629574   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 zma-u.5   100279905   uncharacterized LOC100279905 

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Top 50 coexpressed genes to 107896488 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107896488 (ghi-r.1 coexpression data)

CoexMap"107896488"


ghiLOC107896488 | Entrez gene ID : 107896488    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 2 3 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071108 [list] [network] protein K48-linked deubiquitination  (20 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0071944 [list] [network] cell periphery  (3155 genes)  IEA  
GO MF
GO:0016807 [list] [network] cysteine-type carboxypeptidase activity  (6 genes)  IEA  
GO:1990380 [list] [network] K48-linked deubiquitinase activity  (10 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (141 genes)  IEA  
Protein XP_016677161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  golg 1  (predict for XP_016677161.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016677161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107896488
ath-u.5
for
AT4G11860
ath-u.5
for
AT4G22960
gma-u.5
for
100808340
gma-u.5
for
100797239
gma-u.5
for
121174625
vvi-u.5
for
100263264
ppo-u.5
for
7479246
ppo-u.5
for
7490923
mtr-u.5
for
11437518
sly-u.5
for
101249947
osa-u.5
for
4342044
zma-u.5
for
103629574
zma-u.5
for
100279905


Ortholog ID: 6032
Species ghi ghi ath ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC107923040 LOC107896488 AT4G11860 AT4G22960 LOC103839924 LOC106367017 LOC106375762 LOC102627362 LOC100797239 LOC121174625 LOC100263264 LOC7490923 LOC7479246 LOC11437518 LOC101249947 LOC102600194 LOC107780665 LOC107824775 LOC4342044 LOC103629574 LOC100279905 LOC123159049 LOC123166262 LOC123411033 LOC8064982 LOC100832934 CHLRE_06g304850v5
Function* ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1 FAM63A-like protein (DUF544) FAM63A-like protein (DUF544) ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1-like uncharacterized LOC102627362 ubiquitin carboxyl-terminal hydrolase MINDY-2 uncharacterized LOC121174625 uncharacterized LOC100263264 uncharacterized LOC7490923 uncharacterized LOC7479246 ubiquitin carboxyl-terminal hydrolase MINDY-1 uncharacterized LOC101249947 protein FAM63A uncharacterized LOC107780665 uncharacterized LOC107824775 uncharacterized LOC4342044 ubiquitin carboxyl-terminal hydrolase MINDY-1 uncharacterized LOC100279905 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi03040 Spliceosome 3
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04120 Ubiquitin mediated proteolysis 3
cit03013 Nucleocytoplasmic transport 2
cit00562 Inositol phosphate metabolism 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 7
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107923040 107896488 826793 828395 103839924 106367017 106375762 102627362 100797239 121174625 100263264 7490923 7479246 11437518 101249947 102600194 107780665 107824775 4342044 103629574 100279905 123159049 123166262 123411033 8064982 100832934 66053890
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