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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897200   ATP-dependent DNA helicase DDX11-like 
 ghi-r.1   107913908   ATP-dependent DNA helicase DDX11 
 ath-u.5   AT1G09995   DNA repair DEAD helicase RAD3/XP-D subfamily protein 
 ath-u.5   AT1G79890   RAD3-like DNA-binding helicase protein 
 bra-r.6   103854009   ATP-dependent DNA helicase DDX11 
 bna-r.1   106428474   ATP-dependent DNA helicase DDX11-like 
 bna-r.1   106396149   ATP-dependent DNA helicase DDX11-like 
 cit-r.1   102611409   uncharacterized LOC102611409 
 gma-u.5   106794132   ATP-dependent DNA helicase DDX11 
 mtr-u.5   25480463   ATP-dependent DNA helicase DDX11 
 sly-u.5   101246354   uncharacterized LOC101246354 
 sot-r.1   102579013   probable ATP-dependent RNA helicase DDX11 
 nta-r.1   107831480   uncharacterized LOC107831480 
 nta-r.1   107800491   uncharacterized LOC107800491 
 osa-u.5   9272109   uncharacterized LOC9272109 
 zma-u.5   103637077   ATP-dependent DNA helicase DDX11 
 zma-u.5   103630162   ATP-dependent DNA helicase DDX11 
 hvu-r.1   123427844   putative ATP-dependent RNA helicase DDX11-like protein 8 
 sbi-r.1   8055758   ATP-dependent DNA helicase DDX11 
 bdi-r.1   100828584   ATP-dependent DNA helicase DDX11 
 cre-r.1   CHLRE_07g322300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107897200 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897200 (ghi-r.1 coexpression data)

CoexMap"107897200"


ghiLOC107897200 | Entrez gene ID : 107897200    
Species ghi ath bra bna cit gma mtr sly sot nta osa zma hvu sbi bdi cre ppo vvi tae
Paralog 2 2 1 2 1 1 1 1 1 2 1 2 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034085 [list] [network] establishment of sister chromatid cohesion  (5 genes)  IEA  
GO:0006139 [list] [network] nucleobase-containing compound metabolic process  (4366 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003678 [list] [network] DNA helicase activity  (73 genes)  IEA  
GO:0016818 [list] [network] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  (1750 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040934691.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_040934691.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040934691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897200
ghi-r.1
for
107913908
ath-u.5
for
AT1G09995
ath-u.5
for
AT1G79890
bra-r.6
for
103854009
bna-r.1
for
106428474
bna-r.1
for
106396149
cit-r.1
for
102611409
gma-u.5
for
106794132
mtr-u.5
for
25480463
sly-u.5
for
101246354
sot-r.1
for
102579013
nta-r.1
for
107831480
nta-r.1
for
107800491
osa-u.5
for
9272109
zma-u.5
for
103637077
zma-u.5
for
103630162
hvu-r.1
for
123427844
sbi-r.1
for
8055758
bdi-r.1
for
100828584
cre-r.1
for
CHLRE_07g322300v5


Ortholog ID: 8686
Species ghi ghi ath ath bra bna bna cit gma mtr sly sot nta nta osa zma zma hvu sbi bdi cre
Symbol LOC107897200 LOC107913908 AT1G09995 AT1G79890 LOC103854009 LOC106428474 LOC106396149 LOC102611409 LOC106794132 LOC25480463 LOC101246354 LOC102579013 LOC107831480 LOC107800491 LOC9272109 LOC103637077 LOC103630162 LOC123427844 LOC8055758 LOC100828584 CHLRE_07g322300v5
Function* ATP-dependent DNA helicase DDX11-like ATP-dependent DNA helicase DDX11 DNA repair DEAD helicase RAD3/XP-D subfamily protein RAD3-like DNA-binding helicase protein ATP-dependent DNA helicase DDX11 ATP-dependent DNA helicase DDX11-like ATP-dependent DNA helicase DDX11-like uncharacterized LOC102611409 ATP-dependent DNA helicase DDX11 ATP-dependent DNA helicase DDX11 uncharacterized LOC101246354 probable ATP-dependent RNA helicase DDX11 uncharacterized LOC107831480 uncharacterized LOC107800491 uncharacterized LOC9272109 ATP-dependent DNA helicase DDX11 ATP-dependent DNA helicase DDX11 putative ATP-dependent RNA helicase DDX11-like protein 8 ATP-dependent DNA helicase DDX11 ATP-dependent DNA helicase DDX11 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 5
sly03430 Mismatch repair 3
sly03410 Base excision repair 3
sly03460 Fanconi anemia pathway 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 3
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
zma03430 Mismatch repair 3
zma03410 Base excision repair 3
zma03030 DNA replication 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
zma03430 Mismatch repair 3
zma00230 Purine metabolism 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 4
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 3
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897200 107913908 837534 844328 103854009 106428474 106396149 102611409 106794132 25480463 101246354 102579013 107831480 107800491 9272109 103637077 103630162 123427844 8055758 100828584 5726602
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