ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107897259	ubiquitin domain-containing protein 1
ath-u.5	AT1G16960	Ubiquitin domain-containing protein
ath-u.5	AT1G53400	Ubiquitin domain-containing protein
gma-u.5	100306399	ubiquitin-binding domain-containing protein
gma-u.5	100812911	ubiquitin domain-containing protein 1
vvi-u.5	100247989	uncharacterized LOC100247989
vvi-u.5	100267634	uncharacterized LOC100267634
ppo-u.5	18095450	uncharacterized LOC18095450
ppo-u.5	7455934	uncharacterized LOC7455934
mtr-u.5	11405273	ubiquitin domain-containing protein 1
sly-u.5	101246736	uncharacterized LOC101246736
sly-u.5	101247986	uncharacterized LOC101247986
sly-u.5	101257726	uncharacterized LOC101257726
osa-u.5	4346799	uncharacterized LOC4346799
osa-u.5	4339404	uncharacterized LOC4339404
osa-u.5	4324429	uncharacterized LOC4324429
zma-u.5	100286222	uncharacterized LOC100286222
zma-u.5	100274665	uncharacterized LOC100274665
zma-u.5	100285566	ubiquitin domain containing 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040948144.1 [sequence] [blastp]
XP_040948145.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, nucl 4, chlo 1	(predict for XP_040948144.1)
mito 5, nucl 3, cyto 2	(predict for XP_040948145.1)

Subcellular
localization
TargetP

other 8	(predict for XP_040948144.1)
other 8	(predict for XP_040948145.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107897259	ath-u.5 for AT1G16960	ath-u.5 for AT1G53400	gma-u.5 for 100306399	gma-u.5 for 100812911	vvi-u.5 for 100247989	vvi-u.5 for 100267634	ppo-u.5 for 18095450	ppo-u.5 for 7455934	mtr-u.5 for 11405273	sly-u.5 for 101246736	sly-u.5 for 101247986	sly-u.5 for 101257726	osa-u.5 for 4346799	osa-u.5 for 4339404	osa-u.5 for 4324429	zma-u.5 for 100286222	zma-u.5 for 100274665	zma-u.5 for 100285566

Ortholog

Ortholog ID: 2050

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

ubiquitin domain-containing protein 1

Ubiquitin domain-containing protein

ubiquitin domain-containing protein 2

ubiquitin domain-containing protein 1

uncharacterized LOC102608330

ubiquitin domain-containing protein 1

ubiquitin-binding domain-containing protein

uncharacterized LOC100267634

uncharacterized LOC100247989

uncharacterized LOC18095450

uncharacterized LOC7455934

ubiquitin domain-containing protein 1

uncharacterized LOC101246736

uncharacterized LOC101247986

ubiquitin domain-containing protein 2-like

ubiquitin domain-containing protein 1-like

uncharacterized LOC107773971

uncharacterized LOC107804303

uncharacterized LOC4324429

uncharacterized LOC4346799

uncharacterized LOC100286222

ubiquitin domain containing 1

ubiquitin domain-containing protein 1

ubiquitin domain-containing protein 1-like

ubiquitin domain-containing protein 2-like

ubiquitin domain-containing protein 2

ubiquitin domain-containing protein 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00740	Riboflavin metabolism	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	3
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	4
ppo04517	IgSF CAM signaling	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00071	Fatty acid degradation	2
ppo00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr00510	N-Glycan biosynthesis	2
mtr00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	5
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
sot00051	Fructose and mannose metabolism	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta00071	Fatty acid degradation	2
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma04145	Phagosome	2
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	5
zma04130	SNARE interactions in vesicular transport	4
zma04145	Phagosome	2
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	4
tae04142	Lysosome	4
tae00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	3
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi04130	SNARE interactions in vesicular transport	2
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	5
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

107917868

841776

103868435

103835977

106451474

106407298

102608330

100812911

100306399

100267634

100247989

18095450

7455934

11405273

101246736

101247986

102584620

102595144

107773971

107804303

4324429

4346799

100286222

100285566

123103526

123448848

123440204

8068968

8069834

100827721

100841833

5718437

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107897259 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107897259 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	2	2	2	1	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107897259 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107897259 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**