ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107897443	nascent polypeptide-associated complex subunit beta
ghi-r.1	107909119	nascent polypeptide-associated complex subunit beta
ghi-r.1	107928335	nascent polypeptide-associated complex subunit beta
ghi-r.1	107945960	nascent polypeptide-associated complex subunit beta
ath-u.5	BTF3	basic transcription factor 3
ath-u.5	AT1G73230	Nascent polypeptide-associated complex NAC
bra-r.6	103852841	nascent polypeptide-associated complex subunit beta
bra-r.6	103830761	nascent polypeptide-associated complex subunit beta
bra-r.6	103831803	nascent polypeptide-associated complex subunit beta
bna-r.1	111199313	nascent polypeptide-associated complex subunit beta
bna-r.1	125591269	basic transcription factor 3-like
bna-r.1	106358591	nascent polypeptide-associated complex subunit beta-like
cit-r.1	102607582	nascent polypeptide-associated complex subunit beta
gma-u.5	100306292	uncharacterized LOC100306292
gma-u.5	100499834	uncharacterized LOC100499834
gma-u.5	100500153	basic transcription factor 3
vvi-u.5	100242819	nascent polypeptide-associated complex subunit beta
ppo-u.5	7487429	nascent polypeptide-associated complex subunit beta
ppo-u.5	18106531	nascent polypeptide-associated complex subunit beta
ppo-u.5	18105612	nascent polypeptide-associated complex subunit beta
mtr-u.5	11414689	nascent polypeptide-associated complex subunit beta
mtr-u.5	11443580	nascent polypeptide-associated complex subunit beta
sly-u.5	101268021	nascent polypeptide-associated complex subunit beta
sly-u.5	BTF3	BTF3-like transcription factor
sot-r.1	102589720	transcription factor BTF3 homolog 4-like
sot-r.1	102591076	transcription factor BTF3-like
nta-r.1	107789854	nascent polypeptide-associated complex subunit beta
nta-r.1	107797283	basic transcription factor 3
nta-r.1	107805856	nascent polypeptide-associated complex subunit beta
osa-u.5	4348929	basic transcription factor 3
osa-u.5	4331347	basic transcription factor 3
osa-u.5	4334799	basic transcription factor 3
zma-u.5	100282781	transcription factor BTF3
zma-u.5	100284372	uncharacterized LOC100284372
zma-u.5	100422791	uncharacterized LOC100422791
tae-r.2	123181105	basic transcription factor 3
tae-r.2	123114337	nascent polypeptide-associated complex subunit beta
tae-r.2	123046247	basic transcription factor 3
hvu-r.1	123450048	nascent polypeptide-associated complex subunit beta-like
hvu-r.1	123431439	basic transcription factor 3-like
sbi-r.1	8078022	basic transcription factor 3
sbi-r.1	8067135	basic transcription factor 3
sbi-r.1	8060868	basic transcription factor 3
bdi-r.1	100836116	basic transcription factor 3
bdi-r.1	100846627	basic transcription factor 3
bdi-r.1	100834247	nascent polypeptide-associated complex subunit beta
cre-r.1	CHLRE_03g213537v5	uncharacterized protein

Top 50 coexpressed genes to 107897443 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107897443 (ghi-r.1 coexpression data)

CoexMap"107897443"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005854 [list] [network] nascent polypeptide-associated complex	(16 genes)	IEA
GO:0005829 [list] [network] cytosol	(2580 genes)	IEA

GO MF

Protein

XP_016678390.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 2, mito 2, nucl 1

(predict for XP_016678390.1)

Subcellular
localization
TargetP

other 7, mito 4

(predict for XP_016678390.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107897443	ghi-r.1 for 107909119	ghi-r.1 for 107928335	ghi-r.1 for 107945960	ath-u.5 for BTF3	ath-u.5 for AT1G73230	bra-r.6 for 103852841	bra-r.6 for 103830761	bra-r.6 for 103831803	bna-r.1 for 111199313	bna-r.1 for 125591269	bna-r.1 for 106358591	cit-r.1 for 102607582	gma-u.5 for 100306292	gma-u.5 for 100499834	gma-u.5 for 100500153	vvi-u.5 for 100242819	ppo-u.5 for 7487429	ppo-u.5 for 18106531	ppo-u.5 for 18105612	mtr-u.5 for 11414689	mtr-u.5 for 11443580	sly-u.5 for 101268021	sly-u.5 for BTF3	sot-r.1 for 102589720	sot-r.1 for 102591076	nta-r.1 for 107789854	nta-r.1 for 107797283	nta-r.1 for 107805856	osa-u.5 for 4348929	osa-u.5 for 4331347	osa-u.5 for 4334799	zma-u.5 for 100282781	zma-u.5 for 100284372	zma-u.5 for 100422791	tae-r.2 for 123181105	tae-r.2 for 123114337	tae-r.2 for 123046247	hvu-r.1 for 123450048	hvu-r.1 for 123431439	sbi-r.1 for 8078022	sbi-r.1 for 8067135	sbi-r.1 for 8060868	bdi-r.1 for 100836116	bdi-r.1 for 100846627	bdi-r.1 for 100834247	cre-r.1 for CHLRE_03g213537v5

Ortholog

Ortholog ID: 1596

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

BTF3

BTF3

Function^*

nascent polypeptide-associated complex subunit beta

basic transcription factor 3

Nascent polypeptide-associated complex NAC

nascent polypeptide-associated complex subunit beta

basic transcription factor 3

nascent polypeptide-associated complex subunit beta-like

basic transcription factor 3

nascent polypeptide-associated complex subunit beta

uncharacterized LOC100306292

uncharacterized LOC100499834

basic transcription factor 3

nascent polypeptide-associated complex subunit beta

BTF3-like transcription factor

transcription factor BTF3 homolog 4-like

transcription factor BTF3-like

nascent polypeptide-associated complex subunit beta

basic transcription factor 3

uncharacterized LOC100422791

uncharacterized LOC105667212

uncharacterized LOC100193616

basic transcription factor 3

basic transcription factor 3-like

nascent polypeptide-associated complex subunit beta-like

basic transcription factor 3

nascent polypeptide-associated complex subunit beta

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	9
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	2
bna00062	Fatty acid elongation	2
bna01040	Biosynthesis of unsaturated fatty acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	8
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	10
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr03040	Spliceosome	3
mtr03018	RNA degradation	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	14
sly03018	RNA degradation	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot03050	Proteasome	3
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot03050	Proteasome	3
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03040	Spliceosome	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7
sbi00010	Glycolysis / Gluconeogenesis	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	11

Expression

Expression pattern

Entrez Gene ID^*

107897443

107928335

107888704

838367

843657

103852841

103872567

103842730

106358591

106369038

106427168

102607582

100306292

100499834

100500153

100242819

18106531

18105612

7485194

11414689

11443580

101268021

778344

102589720

102591076

107789854

107797283

107825427

4348929

4331347

4334799

100422791

105667212

100193616

123181105

123094016

123431439

123395122

8078022

8067135

8060868

100836116

100846627

100834247

5724969

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Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	1	3	1	3	2	2	2	3	3	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107897443 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107897443 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**