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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897883   probable methyltransferase PMT3 
 ath-u.5   AT3G23300   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT4G14360   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT1G04430   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   102669038   probable methyltransferase PMT3 
 gma-u.5   102668537   probable methyltransferase PMT3 
 gma-u.5   100819500   probable methyltransferase PMT3 
 vvi-u.5   100243005   probable methyltransferase PMT8 
 vvi-u.5   100263157   probable methyltransferase PMT3 
 ppo-u.5   7479745   probable methyltransferase PMT8 
 ppo-u.5   7454354   probable methyltransferase PMT3 
 mtr-u.5   25485778   probable methyltransferase PMT8 
 mtr-u.5   25484248   probable methyltransferase PMT3 
 mtr-u.5   11425628   probable methyltransferase PMT8 
 sly-u.5   101263378   probable methyltransferase PMT3 
 sly-u.5   104649397   probable methyltransferase PMT3 
 osa-u.5   4348898   probable methyltransferase PMT3 
 zma-u.5   103643455   probable methyltransferase PMT1 
 zma-u.5   100381424   putative methyltransferase PMT3 

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Top 50 coexpressed genes to 107897883 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897883 (ghi-r.1 coexpression data)

CoexMap"107897883"


ghiLOC107897883 | Entrez gene ID : 107897883    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 3 2 2 3 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005802 [list] [network] trans-Golgi network  (296 genes)  IEA  
GO:0005768 [list] [network] endosome  (492 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (698 genes)  IEA  
Protein XP_016678954.2 [sequence] [blastp]
XP_016678955.2 [sequence] [blastp]
XP_040935329.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016678954.2)
chlo 4,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016678955.2)
chlo 4,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040935329.1)
Subcellular
localization
TargetP
scret 6,  mito 4  (predict for XP_016678954.2)
scret 6,  mito 4  (predict for XP_016678955.2)
scret 6,  mito 4  (predict for XP_040935329.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897883
ath-u.5
for
AT3G23300
ath-u.5
for
AT4G14360
ath-u.5
for
AT1G04430
gma-u.5
for
102669038
gma-u.5
for
102668537
gma-u.5
for
100819500
vvi-u.5
for
100243005
vvi-u.5
for
100263157
ppo-u.5
for
7479745
ppo-u.5
for
7454354
mtr-u.5
for
25485778
mtr-u.5
for
25484248
mtr-u.5
for
11425628
sly-u.5
for
101263378
sly-u.5
for
104649397
osa-u.5
for
4348898
zma-u.5
for
103643455
zma-u.5
for
100381424


Ortholog ID: 3340
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107897883 LOC107943310 AT1G04430 AT3G23300 LOC103828754 LOC103859999 LOC106415889 LOC106357894 LOC102627998 LOC100780043 LOC100819500 LOC100243005 LOC100263157 LOC7454354 LOC7479745 LOC11425628 LOC25485778 LOC101263378 LOC104649397 LOC102586628 LOC102601292 LOC107773448 LOC107759039 LOC4348898 LOC103643455 LOC100381424 LOC123181075 LOC123121176 LOC123431098 LOC8070486 LOC100839930
Function* probable methyltransferase PMT3 probable methyltransferase PMT3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein probable methyltransferase PMT1 probable methyltransferase PMT1 probable methyltransferase PMT1 probable methyltransferase PMT1 probable methyltransferase PMT8 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT8 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT8 probable methyltransferase PMT8 probable methyltransferase PMT8 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT3 putative methyltransferase PMT3 putative methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT1 putative methyltransferase PMT3 probable methyltransferase PMT8 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT3 probable methyltransferase PMT3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 5
vvi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 3
sly01240 Biosynthesis of cofactors 2
sly00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00541 Biosynthesis of various nucleotide sugars 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00541 Biosynthesis of various nucleotide sugars 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897883 107943310 839522 821910 103828754 103859999 106415889 106357894 102627998 100780043 100819500 100243005 100263157 7454354 7479745 11425628 25485778 101263378 104649397 102586628 102601292 107773448 107759039 4348898 103643455 100381424 123181075 123121176 123431098 8070486 100839930
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