Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107899749   protein root UVB sensitive 6 
 ghi-r.1   107910665   protein root UVB sensitive 6 
 ath-u.5   RUS6   root UVB sensitive protein (Protein of unknown function, DUF647) 
 bra-r.6   103852204   protein root UVB sensitive 6 
 bna-r.1   106406733   protein root UVB sensitive 6 
 bna-r.1   106347004   protein root UVB sensitive 6 
 cit-r.1   102622928   protein root UVB sensitive 6 
 gma-u.5   100806192   protein root UVB sensitive 6 
 gma-u.5   100785202   protein root UVB sensitive 6 
 vvi-u.5   100267802   protein root UVB sensitive 6 
 ppo-u.5   18098373   protein root UVB sensitive 6 
 mtr-u.5   11439242   protein root UVB sensitive 6 
 mtr-u.5   25494367   protein root UVB sensitive 6 
 sly-u.5   101258196   protein root UVB sensitive 6 
 sot-r.1   102593461   protein root UVB sensitive 6 
 nta-r.1   107794413   protein root UVB sensitive 6 
 nta-r.1   107769419   protein root UVB sensitive 6 
 osa-u.5   4338817   protein root UVB sensitive 6 
 osa-u.5   9270767   protein root UVB sensitive 6 
 zma-u.5   103637150   protein root UVB sensitive 6 
 zma-u.5   100278802   uncharacterized LOC100278802 
 zma-u.5   100277253   uncharacterized LOC100277253 
 tae-r.2   123133616   protein root UVB sensitive 6 
 tae-r.2   123080108   protein root UVB sensitive 6 
 tae-r.2   123062914   protein root UVB sensitive 6 
 hvu-r.1   123442799   protein root UVB sensitive 6-like 
 hvu-r.1   123445101   protein root UVB sensitive 6-like 
 sbi-r.1   8076968   protein root UVB sensitive 6 
 sbi-r.1   110433811   protein root UVB sensitive 6-like 
 bdi-r.1   100829579   protein root UVB sensitive 6 
 bdi-r.1   100828491   protein root UVB sensitive 6 
 cre-r.1   CHLRE_12g560250v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107899749 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107899749 (ghi-r.1 coexpression data)

CoexMap"107899749"


ghiLOC107899749 | Entrez gene ID : 107899749    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 2 1 1 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015074 [list] [network] DNA integration  (103 genes)  IEA  
GO CC
GO MF
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_016681025.1 [sequence] [blastp]
XP_040949746.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for XP_016681025.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040949746.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016681025.1)
chlo 8  (predict for XP_040949746.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107899749
ghi-r.1
for
107910665
ath-u.5
for
RUS6
bra-r.6
for
103852204
bna-r.1
for
106406733
bna-r.1
for
106347004
cit-r.1
for
102622928
gma-u.5
for
100806192
gma-u.5
for
100785202
vvi-u.5
for
100267802
ppo-u.5
for
18098373
mtr-u.5
for
11439242
mtr-u.5
for
25494367
sly-u.5
for
101258196
sot-r.1
for
102593461
nta-r.1
for
107794413
nta-r.1
for
107769419
osa-u.5
for
4338817
osa-u.5
for
9270767
zma-u.5
for
103637150
zma-u.5
for
100278802
zma-u.5
for
100277253
tae-r.2
for
123133616
tae-r.2
for
123080108
tae-r.2
for
123062914
hvu-r.1
for
123442799
hvu-r.1
for
123445101
sbi-r.1
for
8076968
sbi-r.1
for
110433811
bdi-r.1
for
100829579
bdi-r.1
for
100828491
cre-r.1
for
CHLRE_12g560250v5


Ortholog ID: 5856
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107899749 LOC107910665 RUS6 LOC103852204 LOC106406733 LOC106347004 LOC102622928 LOC100806192 LOC100785202 LOC100267802 LOC18098373 LOC11439242 LOC25494367 LOC101258196 LOC102593461 LOC107794413 LOC107769419 LOC4338817 LOC9270767 LOC100278802 LOC100277253 LOC115032971 LOC123080108 LOC123062914 LOC123056255 LOC123442799 LOC123445101 LOC8076968 LOC110433811 LOC100829579 LOC100828491 CHLRE_12g560250v5
Function* protein root UVB sensitive 6 protein root UVB sensitive 6 root UVB sensitive protein (Protein of unknown function, DUF647) protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 uncharacterized LOC100278802 uncharacterized LOC100277253 uncharacterized 115032971 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6 protein root UVB sensitive 6-like protein root UVB sensitive 6-like protein root UVB sensitive 6 protein root UVB sensitive 6-like protein root UVB sensitive 6 protein root UVB sensitive 6 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 7
ghi04814 Motor proteins 4
ghi00061 Fatty acid biosynthesis 4
ghi00780 Biotin metabolism 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00061 Fatty acid biosynthesis 6
ghi00780 Biotin metabolism 6
ghi01212 Fatty acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 9
ath01200 Carbon metabolism 9
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 6
ath00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00780 Biotin metabolism 8
bna00061 Fatty acid biosynthesis 5
bna01212 Fatty acid metabolism 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00780 Biotin metabolism 8
bna01240 Biosynthesis of cofactors 6
bna00010 Glycolysis / Gluconeogenesis 5
bna00620 Pyruvate metabolism 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
cit00010 Glycolysis / Gluconeogenesis 2
cit00051 Fructose and mannose metabolism 2
cit00052 Galactose metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00730 Thiamine metabolism 2
gma00051 Fructose and mannose metabolism 2
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 8
gma00061 Fatty acid biosynthesis 7
gma01212 Fatty acid metabolism 7
gma00620 Pyruvate metabolism 7
gma00640 Propanoate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly04382 Cornified envelope formation 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 3
osa01200 Carbon metabolism 3
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 3
tae01040 Biosynthesis of unsaturated fatty acids 3
tae01212 Fatty acid metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
tae00480 Glutathione metabolism 2
tae00061 Fatty acid biosynthesis 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107899749 107910665 835045 103852204 106406733 106347004 102622928 100806192 100785202 100267802 18098373 11439242 25494367 101258196 102593461 107794413 107769419 4338817 9270767 100278802 100277253 115032971 123080108 123062914 123056255 123442799 123445101 8076968 110433811 100829579 100828491 5728674
The preparation time of this page was 0.2 [sec].