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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107900567   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic 
 ath-u.5   GPDHC1   6-phosphogluconate dehydrogenase family protein 
 ath-u.5   AT3G07690   6-phosphogluconate dehydrogenase family protein 
 gma-u.5   100810871   glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic 
 gma-u.5   100807558   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 gma-u.5   100797552   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 vvi-u.5   100241426   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 vvi-u.5   100233040   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 ppo-u.5   7462766   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 ppo-u.5   7468920   glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic 
 ppo-u.5   7473597   glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic 
 mtr-u.5   11418472   glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic 
 mtr-u.5   112418482   glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic 
 sly-u.5   101264154   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 sly-u.5   101260923   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 osa-u.5   4326512   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic 
 osa-u.5   4327964   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic 
 osa-u.5   4339200   probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic 
 zma-u.5   100191807   glycerol-3-phosphate dehydrogenase 
 zma-u.5   100273065   glycerol-3-phosphate dehydrogenase 
 zma-u.5   100273469   Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1 cytosolic 

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Top 50 coexpressed genes to 107900567 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107900567 (ghi-r.1 coexpression data)

CoexMap"107900567"


ghiLOC107900567 | Entrez gene ID : 107900567    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 3 2 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00564 [list] [network] Glycerophospholipid metabolism (260 genes)
GO BP
GO:0046168 [list] [network] glycerol-3-phosphate catabolic process  (9 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (1780 genes)  IEA  
GO CC
GO:0009331 [list] [network] glycerol-3-phosphate dehydrogenase (FAD) complex  (13 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0047952 [list] [network] glycerol-3-phosphate dehydrogenase [NAD(P)+] activity  (9 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (211 genes)  IEA  
Protein XP_016681699.1 [sequence] [blastp]
XP_016681701.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 3  (predict for XP_016681699.1)
cyto 6,  cysk 3  (predict for XP_016681701.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016681699.1)
other 8  (predict for XP_016681701.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107900567

.
ath-u.5
for
GPDHC1

.
ath-u.5
for
AT3G07690

.
gma-u.5
for
100810871

.
gma-u.5
for
100807558

.
gma-u.5
for
100797552

.
vvi-u.5
for
100241426

.
vvi-u.5
for
100233040

.
ppo-u.5
for
7462766

.
ppo-u.5
for
7468920

.
ppo-u.5
for
7473597

.
mtr-u.5
for
11418472

.
mtr-u.5
for
112418482

.
sly-u.5
for
101264154

.
sly-u.5
for
101260923

.
osa-u.5
for
4326512

.
osa-u.5
for
4327964

.
osa-u.5
for
4339200

.
zma-u.5
for
100191807

.
zma-u.5
for
100273065

.
zma-u.5
for
100273469

.


Ortholog ID: 2268
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GPDHC1 AT3G07690 LOC100797552 LOC100810871 LOC101264154 LOC101260923 LOC4339200 LOC4327964 LOC100273469 LOC100191807 LOC103857987 LOC103870644 LOC100241426 LOC100233040 LOC7462766 LOC7468920 LOC11418472 LOC112418482 LOC123079455 LOC123062322 LOC123443798 LOC123444623 LOC107889415 LOC107891323 LOC106396766 LOC106437983 LOC8062295 LOC8082400 LOC102593283 LOC102595194 LOC102610048 LOC102614948 LOC100825190 LOC100839074 LOC107787268 LOC107801613
Function* 6-phosphogluconate dehydrogenase family protein 6-phosphogluconate dehydrogenase family protein probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1 cytosolic glycerol-3-phosphate dehydrogenase glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] At3g07690, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic-like glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic putative glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic putative glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 4
ath00062 Fatty acid elongation 4
ath01040 Biosynthesis of unsaturated fatty acids 3
ath00564 Glycerophospholipid metabolism 2
ath00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 5
gma01212 Fatty acid metabolism 3
gma00073 Cutin, suberine and wax biosynthesis 2
gma00061 Fatty acid biosynthesis 2
gma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 5
gma00071 Fatty acid degradation 5
gma01212 Fatty acid metabolism 5
gma04146 Peroxisome 5
gma00564 Glycerophospholipid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00062 Fatty acid elongation 6
sly04626 Plant-pathogen interaction 5
sly00564 Glycerophospholipid metabolism 4
sly00561 Glycerolipid metabolism 3
sly02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 4
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
zma00564 Glycerophospholipid metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00062 Fatty acid elongation 3
bra01212 Fatty acid metabolism 3
bra00564 Glycerophospholipid metabolism 3
bra01040 Biosynthesis of unsaturated fatty acids 2
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 2
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 4
mtr00564 Glycerophospholipid metabolism 4
mtr00073 Cutin, suberine and wax biosynthesis 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00240 Pyrimidine metabolism 6
tae01232 Nucleotide metabolism 6
tae00564 Glycerophospholipid metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00240 Pyrimidine metabolism 6
tae01232 Nucleotide metabolism 6
tae00564 Glycerophospholipid metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 9
ghi01040 Biosynthesis of unsaturated fatty acids 8
ghi01212 Fatty acid metabolism 8
ghi00564 Glycerophospholipid metabolism 2
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 8
ghi01040 Biosynthesis of unsaturated fatty acids 8
ghi01212 Fatty acid metabolism 8
ghi00564 Glycerophospholipid metabolism 2
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna00190 Oxidative phosphorylation 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna00190 Oxidative phosphorylation 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
sbi01230 Biosynthesis of amino acids 7
sbi00940 Phenylpropanoid biosynthesis 3
sbi00360 Phenylalanine metabolism 2
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 3
sot04626 Plant-pathogen interaction 3
sot00564 Glycerophospholipid metabolism 2
sot00073 Cutin, suberine and wax biosynthesis 2
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit04075 Plant hormone signal transduction 2
cit00061 Fatty acid biosynthesis 2
cit01212 Fatty acid metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 4
nta02010 ABC transporters 2
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818752 819960 100797552 100810871 101264154 101260923 4339200 4327964 100273469 100191807 103857987 103870644 100241426 100233040 7462766 7468920 11418472 112418482 123079455 123062322 123443798 123444623 107889415 107891323 106396766 106437983 8062295 8082400 102593283 102595194 102610048 102614948 100825190 100839074 107787268 107801613
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