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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107900816   GTPase LSG1-2 
 ath-u.5   AT2G27200   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT1G08410   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100817523   GTPase LSG1-2 
 gma-u.5   100815023   GTPase LSG1-2 
 gma-u.5   100778137   GTPase LSG1-2 
 vvi-u.5   100258825   GTPase LSG1-2 
 ppo-u.5   7491116   GTPase LSG1-2 
 mtr-u.5   11444051   GTPase LSG1-1 
 sly-u.5   101261781   GTPase LSG1-2 
 osa-u.5   4333574   GTPase LSG1-2 
 osa-u.5   4352809   GTPase LSG1-2 
 zma-u.5   100501989   uncharacterized LOC100501989 

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Top 50 coexpressed genes to 107900816 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107900816 (ghi-r.1 coexpression data)

CoexMap"107900816"


ghiLOC107900816 | Entrez gene ID : 107900816    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 3 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03008 [list] [network] Ribosome biogenesis in eukaryotes (1571 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (613 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (687 genes)  IEA  
Protein XP_016682060.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016682060.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016682060.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107900816

.
ath-u.5
for
AT2G27200

.
ath-u.5
for
AT1G08410

.
gma-u.5
for
100817523

.
gma-u.5
for
100815023

.
gma-u.5
for
100778137

.
vvi-u.5
for
100258825

.
ppo-u.5
for
7491116

.
mtr-u.5
for
11444051

.
sly-u.5
for
101261781

.
osa-u.5
for
4333574

.
osa-u.5
for
4352809

.
zma-u.5
for
100501989

.


Ortholog ID: 5690
Species ath ath gma gma sly osa osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT2G27200 AT1G08410 LOC100775499 LOC100817523 LOC101261781 LOC4333574 LOC4352809 LOC100501989 LOC103864762 LOC103836394 LOC100258825 LOC7491116 LOC11444051 LOC123122713 LOC123110227 LOC123452103 LOC123395560 LOC107889227 LOC107900816 LOC106383109 LOC106411413 CHLRE_16g680944v5 LOC8071482 LOC102580337 LOC102631094 LOC100831003 LOC100829536 LOC107812208 LOC107795579
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 uncharacterized LOC100501989 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2-like GTPase LSG1-1-like GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1-like uncharacterized protein GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1-like GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00052 Galactose metabolism 2
ath00561 Glycerolipid metabolism 2
ath03250 Viral life cycle - HIV-1 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04144 Endocytosis 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817262 837361 100775499 100817523 101261781 4333574 4352809 100501989 103864762 103836394 100258825 7491116 11444051 123122713 123110227 123452103 123395560 107889227 107900816 106383109 106411413 5724819 8071482 102580337 102631094 100831003 100829536 107812208 107795579
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