ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107900926	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
ghi-r.1	107887332	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
ath-u.5	RGXT2	rhamnogalacturonan xylosyltransferase 2
ath-u.5	MGP4	Nucleotide-diphospho-sugar transferase family protein
ath-u.5	RGXT1	rhamnogalacturonan xylosyltransferase 1
bra-r.6	103829166	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3
bra-r.6	103829155	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
bna-r.1	106438620	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
bna-r.1	106438652	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
cit-r.1	127901184	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
cit-r.1	102628491	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
gma-u.5	100775719	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
vvi-u.5	100244803	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
vvi-u.5	100249591	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
ppo-u.5	7492743	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
ppo-u.5	7457370	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
mtr-u.5	25493437	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
sly-u.5	101246090	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
sot-r.1	102591057	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
nta-r.1	107800014	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
nta-r.1	107824067	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
osa-u.5	4338659	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
zma-u.5	100276040	UDP-D-xylose:L-fucose alpha-13-D-xylosyltransferase MGP4
tae-r.2	123054182	uncharacterized LOC123054182
tae-r.2	123130911	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
hvu-r.1	123439866	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
hvu-r.1	123448250	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
sbi-r.1	8077954	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
bdi-r.1	100839509	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

Annotation

functional annotation

KEGG

GO BP

GO:0010306 [list] [network] rhamnogalacturonan II biosynthetic process

(2 genes)

IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus

(1381 genes)

IEA

GO MF

GO:0035252 [list] [network] UDP-xylosyltransferase activity

(9 genes)

IEA

Protein

XP_016682198.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 3

(predict for XP_016682198.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_016682198.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107900926	ghi-r.1 for 107887332	ath-u.5 for RGXT2	ath-u.5 for MGP4	ath-u.5 for RGXT1	bra-r.6 for 103829166	bra-r.6 for 103829155	bna-r.1 for 106438620	bna-r.1 for 106438652	cit-r.1 for 127901184	cit-r.1 for 102628491	gma-u.5 for 100775719	vvi-u.5 for 100244803	vvi-u.5 for 100249591	ppo-u.5 for 7492743	ppo-u.5 for 7457370	mtr-u.5 for 25493437	sly-u.5 for 101246090	sot-r.1 for 102591057	nta-r.1 for 107800014	nta-r.1 for 107824067	osa-u.5 for 4338659	zma-u.5 for 100276040	tae-r.2 for 123054182	tae-r.2 for 123130911	hvu-r.1 for 123439866	hvu-r.1 for 123448250	sbi-r.1 for 8077954	bdi-r.1 for 100839509

Ortholog

Ortholog ID: 3481

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC107900926

LOC107887332

RGXT2

MGP4

RGXT3

Function^*