ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107902802	protein NLP9
ghi-r.1	107914635	protein NLP9
ghi-r.1	107911355	protein NLP6
ghi-r.1	107910288	protein NLP8
ath-u.5	AT2G17150	Plant regulator RWP-RK family protein
ath-u.5	AT1G76350	Plant regulator RWP-RK family protein
ath-u.5	AT1G64530	Plant regulator RWP-RK family protein
bra-r.6	103866723	protein NLP8
bra-r.6	103866075	protein NLP8
bra-r.6	103858074	protein NLP8-like
bna-r.1	106402843	protein NLP9
bna-r.1	106375260	protein NLP2-like
bna-r.1	106376006	protein NLP7-like
cit-r.1	102617751	protein NLP4
cit-r.1	102611491	protein NLP9-like
cit-r.1	102623162	protein NLP7
gma-u.5	100786118	protein NLP6
gma-u.5	100804426	protein NLP8
gma-u.5	100798024	protein NLP2
vvi-u.5	100263398	protein NLP6
vvi-u.5	100267426	protein NLP2
vvi-u.5	100262961	protein NLP9
ppo-u.5	7485639	protein NLP5
mtr-u.5	25479714	protein NLP7
mtr-u.5	11423270	protein NLP9
mtr-u.5	25490310	protein NLP4
sly-u.5	101247739	protein NLP6-like
sly-u.5	101256430	protein NLP2
sly-u.5	101246738	protein NLP9-like
sot-r.1	102601351	protein NLP6-like
sot-r.1	102581207	protein NLP7-like
sot-r.1	102598698	protein NLP2
nta-r.1	107767655	protein NLP5
nta-r.1	107824854	protein NLP6
nta-r.1	107824071	protein NLP4-like
osa-u.5	4331508	protein NLP1-like
osa-u.5	4350238	protein NLP2-like
osa-u.5	4336275	protein NLP2-like
zma-u.5	100381753	uncharacterized LOC100381753
zma-u.5	100383982	uncharacterized LOC100383982
zma-u.5	103635017	protein NLP3
tae-r.2	123045891	protein NLP2
tae-r.2	123053765	protein NLP2
tae-r.2	123060841	protein NLP3
hvu-r.1	123427118	protein NLP2-like
hvu-r.1	123402430	protein NLP3-like
sbi-r.1	8085681	protein NLP1
sbi-r.1	8074162	protein NLP1
sbi-r.1	8077550	protein NLP3
bdi-r.1	100826804	protein NLP1
bdi-r.1	100844863	protein NLP3
bdi-r.1	100845720	protein NLP2
cre-r.1	CHLRE_03g177700v5	uncharacterized protein

Top 50 coexpressed genes to 107902802 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107902802 (ghi-r.1 coexpression data)

CoexMap"107902802"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(3140 genes)	IEA
GO:0005515 [list] [network] protein binding	(10797 genes)	IEA

Protein

XP_016684412.1 [sequence] [blastp]
XP_016684416.1 [sequence] [blastp]
XP_040943888.1 [sequence] [blastp]
XP_040943889.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, vacu 1	(predict for XP_016684412.1)
nucl 9, cyto 1, vacu 1	(predict for XP_016684416.1)
nucl 9, cyto 1, vacu 1	(predict for XP_040943888.1)
nucl 9, cyto 1, vacu 1	(predict for XP_040943889.1)

Subcellular
localization
TargetP

other 8	(predict for XP_016684412.1)
other 8	(predict for XP_016684416.1)
other 8	(predict for XP_040943888.1)
other 8	(predict for XP_040943889.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107902802	ghi-r.1 for 107914635	ghi-r.1 for 107911355	ghi-r.1 for 107910288	ath-u.5 for AT2G17150	ath-u.5 for AT1G76350	ath-u.5 for AT1G64530	bra-r.6 for 103866723	bra-r.6 for 103866075	bra-r.6 for 103858074	bna-r.1 for 106402843	bna-r.1 for 106375260	bna-r.1 for 106376006	cit-r.1 for 102617751	cit-r.1 for 102611491	cit-r.1 for 102623162	gma-u.5 for 100786118	gma-u.5 for 100804426	gma-u.5 for 100798024	vvi-u.5 for 100263398	vvi-u.5 for 100267426	vvi-u.5 for 100262961	ppo-u.5 for 7485639	mtr-u.5 for 25479714	mtr-u.5 for 11423270	mtr-u.5 for 25490310	sly-u.5 for 101247739	sly-u.5 for 101256430	sly-u.5 for 101246738	sot-r.1 for 102601351	sot-r.1 for 102581207	sot-r.1 for 102598698	nta-r.1 for 107767655	nta-r.1 for 107824854	nta-r.1 for 107824071	osa-u.5 for 4331508	osa-u.5 for 4350238	osa-u.5 for 4336275	zma-u.5 for 100381753	zma-u.5 for 100383982	zma-u.5 for 103635017	tae-r.2 for 123045891	tae-r.2 for 123053765	tae-r.2 for 123060841	hvu-r.1 for 123427118	hvu-r.1 for 123402430	sbi-r.1 for 8085681	sbi-r.1 for 8074162	sbi-r.1 for 8077550	bdi-r.1 for 100826804	bdi-r.1 for 100844863	bdi-r.1 for 100845720	cre-r.1 for CHLRE_03g177700v5

Ortholog

Ortholog ID: 230

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

NINA

Function^*

protein NLP2

protein NLP6

protein NLP2

Plant regulator RWP-RK family protein

protein NLP8

protein NLP5

protein NLP4

protein NLP5

protein NLP4-like

protein NLP4

protein NLP9-like

protein NLP2

protein NLP7

protein NODULE INCEPTION 2a

protein NODULE INCEPTION 1a

protein NLP9

protein NLP4

protein NLP4-like

protein NLP7

protein NLP9

protein NLP7

protein NLP9

protein NLP5

protein NLP9-like

protein NLP7-like

protein NLP9

protein NLP2

protein NLP4

protein NLP9-like

protein NLP9

protein NLP6-like

protein NLP9

protein NLP2-like

protein NLP1-like

protein NLP3-like

uncharacterized LOC100381753

protein NLP2

NIN-like protein 1

protein NLP2

protein NLP3

protein NLP1

protein NLP2-like

protein NLP1

protein NLP2

protein NLP3

protein NLP2

protein NLP1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00710	Carbon fixation by Calvin cycle	3
ppo01200	Carbon metabolism	3
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae00040	Pentose and glucuronate interconversions	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

Expression

Expression pattern

Entrez Gene ID^*

107908608

107951378

107931923

842761

825127

818951

103866723

103832092

103872852

106406403

106411272

106440730

102617751

102611491

102616132

100797708

100792100

100787220

100262961

100253057

100258191

7477839

7469575

25479714

11423270

11421786

101246738

101261639

101260397

102598698

102599232

102602337

107779869

107790861

107828483

4350238

9268032

4328230

100381753

103646273

100285205

123045891

123077913

123105806

123427118

123447816

8085681

8074162

8060198

100844863

100845720

100825769

5728827

The preparation time of this page was 0.3 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	1	3	3	3	3	3	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107902802 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107902802 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**