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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107903406   sufE-like protein 1, chloroplastic/mitochondrial 
 ghi-r.1   121215350   sufE-like protein 1, chloroplastic/mitochondrial 
 ghi-r.1   121209895   sufE-like protein 1, chloroplastic/mitochondrial 
 ghi-r.1   107931164   sufE-like protein 1, chloroplastic/mitochondrial 
 bra-r.6   103866260   sufE-like protein 1, chloroplastic/mitochondrial 
 bna-r.1   106428298   sufE-like protein 1, chloroplastic/mitochondrial 
 bna-r.1   106445179   sufE-like protein 1, chloroplastic/mitochondrial 
 cit-r.1   102610573   sufE-like protein 1, chloroplastic/mitochondrial 
 gma-u.5   100779254   sufE-like protein 1, chloroplastic/mitochondrial 
 vvi-u.5   100242888   sufE-like protein 1, chloroplastic/mitochondrial 
 ppo-u.5   18103535   sufE-like protein 1, chloroplastic/mitochondrial 
 ppo-u.5   7457649   sufE-like protein 1, chloroplastic/mitochondrial 
 mtr-u.5   25483152   sufE-like protein 1, chloroplastic/mitochondrial 
 sly-u.5   101250088   sufE-like protein 1, chloroplastic/mitochondrial 
 sot-r.1   102601124   sufE-like protein 1, chloroplastic/mitochondrial 
 nta-r.1   107824028   sufE-like protein 1, chloroplastic/mitochondrial 
 nta-r.1   107781219   sufE-like protein 1, chloroplastic/mitochondrial 
 nta-r.1   107771757   sufE-like protein 1, chloroplastic/mitochondrial 
 osa-u.5   4331656   sufE-like protein 1, chloroplastic/mitochondrial 
 osa-u.5   4346577   sufE-like protein 1, chloroplastic/mitochondrial 
 zma-u.5   100286086   uncharacterized LOC100286086 
 tae-r.2   123111590   sufE-like protein 1, chloroplastic/mitochondrial 
 tae-r.2   123120948   sufE-like protein 1, chloroplastic/mitochondrial 
 tae-r.2   123103389   sufE-like protein 1, chloroplastic/mitochondrial 
 hvu-r.1   123395269   sufE-like protein 1, chloroplastic/mitochondrial 
 sbi-r.1   110433819   sufE-like protein 1, chloroplastic/mitochondrial 
 bdi-r.1   100824233   sufE-like protein 1, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_06g309717v5   uncharacterized protein 

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Top 50 coexpressed genes to 107903406 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107903406 (ghi-r.1 coexpression data)

CoexMap"107903406"


ghiLOC107903406 | Entrez gene ID : 107903406    
Species ghi bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 4 1 2 1 1 1 2 1 1 1 3 2 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (65 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
Protein XP_016684932.2 [sequence] [blastp]
XP_016684933.2 [sequence] [blastp]
XP_016684934.2 [sequence] [blastp]
XP_016684936.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_016684932.2)
nucl 5,  chlo 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_016684933.2)
nucl 5,  chlo 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_016684934.2)
nucl 5,  chlo 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_016684936.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016684932.2)
chlo 9  (predict for XP_016684933.2)
chlo 9  (predict for XP_016684934.2)
chlo 9  (predict for XP_016684936.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107903406
ghi-r.1
for
121215350
ghi-r.1
for
121209895
ghi-r.1
for
107931164
bra-r.6
for
103866260
bna-r.1
for
106428298
bna-r.1
for
106445179
cit-r.1
for
102610573
gma-u.5
for
100779254
vvi-u.5
for
100242888
ppo-u.5
for
18103535
ppo-u.5
for
7457649
mtr-u.5
for
25483152
sly-u.5
for
101250088
sot-r.1
for
102601124
nta-r.1
for
107824028
nta-r.1
for
107781219
nta-r.1
for
107771757
osa-u.5
for
4331656
osa-u.5
for
4346577
zma-u.5
for
100286086
tae-r.2
for
123111590
tae-r.2
for
123120948
tae-r.2
for
123103389
hvu-r.1
for
123395269
sbi-r.1
for
110433819
bdi-r.1
for
100824233
cre-r.1
for
CHLRE_06g309717v5


Ortholog ID: 7676
Species ghi ghi ghi bra bna bna cit gma vvi ppo ppo mtr sly sot nta nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC121215350 LOC121209895 LOC107931164 LOC103866260 LOC106428298 LOC106445179 LOC102610573 LOC100779254 LOC100242888 LOC18103535 LOC7457649 LOC25483152 LOC101250088 LOC102601124 LOC107824028 LOC107781219 LOC107771757 LOC4331656 LOC4346577 LOC100286086 LOC123111590 LOC123120948 LOC123103389 LOC123395269 LOC110433819 LOC100824233 CHLRE_06g309717v5
Function* sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial uncharacterized LOC100286086 sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial sufE-like protein 1, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
bra00030 Pentose phosphate pathway 5
bra01230 Biosynthesis of amino acids 4
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00620 Pyruvate metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 4
sot01230 Biosynthesis of amino acids 3
sot04141 Protein processing in endoplasmic reticulum 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta00030 Pentose phosphate pathway 5
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta00030 Pentose phosphate pathway 5
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
zma04122 Sulfur relay system 2
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre01240 Biosynthesis of cofactors 2
cre00260 Glycine, serine and threonine metabolism 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121215350 121209895 107931164 103866260 106428298 106445179 102610573 100779254 100242888 18103535 7457649 25483152 101250088 102601124 107824028 107781219 107771757 4331656 4346577 100286086 123111590 123120948 123103389 123395269 110433819 100824233 5716815
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