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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107903929   26S proteasome non-ATPase regulatory subunit 10 
 ath-u.5   AT2G03430   Ankyrin repeat family protein 
 gma-u.5   100499930   ankyrin repeat-containing protein 
 gma-u.5   100795610   ankyrin repeats-containing protein 
 ppo-u.5   7481548   uncharacterized LOC7481548 
 mtr-u.5   11415001   26S proteasome non-ATPase regulatory subunit 10 
 sly-u.5   101250015   uncharacterized LOC101250015 
 osa-u.5   4334173   uncharacterized LOC4334173 
 zma-u.5   100284046   26S proteasome non-ATPase regulatory subunit 10 

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Top 50 coexpressed genes to 107903929 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107903929 (ghi-r.1 coexpression data)

CoexMap"107903929"


ghiLOC107903929 | Entrez gene ID : 107903929    
Species ghi ath gma ppo mtr sly osa zma hvu vvi bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (1027 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016685633.1 [sequence] [blastp]
XP_040948849.1 [sequence] [blastp]
XP_040948850.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 1,  nucl_plas 1,  nucl 1,  plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_016685633.1)
cyto 5,  cysk 1,  nucl_plas 1,  nucl 1,  plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_040948849.1)
cyto 5,  cysk 1,  nucl_plas 1,  nucl 1,  plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_040948850.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016685633.1)
other 8  (predict for XP_040948849.1)
other 8  (predict for XP_040948850.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107903929
ath-u.5
for
AT2G03430
gma-u.5
for
100499930
gma-u.5
for
100795610
ppo-u.5
for
7481548
mtr-u.5
for
11415001
sly-u.5
for
101250015
osa-u.5
for
4334173
zma-u.5
for
100284046


Ortholog ID: 7500
Species ghi ghi ath bra bna bna cit gma gma ppo mtr sly sot nta osa zma tae tae sbi bdi cre
Symbol LOC107960326 LOC107903929 AT2G03430 LOC103839405 LOC111212824 LOC106437940 LOC102617699 LOC100795610 LOC100499930 LOC7481548 LOC11415001 LOC101250015 LOC102604063 LOC107778106 LOC4334173 LOC100284046 LOC123105084 LOC123113376 LOC8085917 LOC100820844 CHLRE_02g117550v5
Function* 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 Ankyrin repeat family protein 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 uncharacterized LOC102617699 ankyrin repeats-containing protein ankyrin repeat-containing protein uncharacterized LOC7481548 26S proteasome non-ATPase regulatory subunit 10 uncharacterized LOC101250015 26S proteasome non-ATPase regulatory subunit 10 uncharacterized LOC107778106 uncharacterized LOC4334173 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 10 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot00030 Pentose phosphate pathway 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03020 RNA polymerase 3
nta03420 Nucleotide excision repair 3
nta03050 Proteasome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107960326 107903929 814872 103839405 111212824 106437940 102617699 100795610 100499930 7481548 11415001 101250015 102604063 107778106 4334173 100284046 123105084 123113376 8085917 100820844 5727972
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