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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107905084   isoamylase 3, chloroplastic 
 ath-u.5   ISA3   isoamylase 3 
 gma-u.5   100807545   isoamylase 3, chloroplastic 
 gma-u.5   100806342   isoamylase 3, chloroplastic 
 vvi-u.5   100255802   isoamylase 3, chloroplastic 
 ppo-u.5   7467181   isoamylase 3, chloroplastic 
 mtr-u.5   11434670   isoamylase 3, chloroplastic 
 sly-u.5   101261524   isoamylase 3, chloroplastic 
 osa-u.5   4347328   isoamylase 3, chloroplastic-like 
 zma-u.5   542095   isoamylase-type starch debranching enzyme ISO3 

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Top 50 coexpressed genes to 107905084 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107905084 (ghi-r.1 coexpression data)

CoexMap"107905084"


ghiLOC107905084 | Entrez gene ID : 107905084    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00500 [list] [network] Starch and sucrose metabolism (349 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1780 genes)  IEA  
GO CC
GO MF
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (944 genes)  IEA  
Protein XP_016687144.2 [sequence] [blastp]
XP_016687145.2 [sequence] [blastp]
XP_040950200.1 [sequence] [blastp]
XP_040950201.1 [sequence] [blastp]
XP_040950202.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_016687144.2)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_016687145.2)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_040950200.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_040950201.1)
cyto 6,  nucl 4  (predict for XP_040950202.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016687144.2)
chlo 9  (predict for XP_016687145.2)
chlo 9  (predict for XP_040950200.1)
chlo 9  (predict for XP_040950201.1)
other 6  (predict for XP_040950202.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107905084
ath-u.5
for
ISA3
gma-u.5
for
100807545
gma-u.5
for
100806342
vvi-u.5
for
100255802
ppo-u.5
for
7467181
mtr-u.5
for
11434670
sly-u.5
for
101261524
osa-u.5
for
4347328
zma-u.5
for
542095


Ortholog ID: 10172
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107957785 LOC107905084 ISA3 LOC103858505 LOC106438474 LOC106435675 LOC102616082 LOC100807545 LOC100806342 LOC100255802 LOC7467181 LOC11434670 LOC101261524 LOC102577824 LOC107771936 LOC4347328 LOC542095 LOC123104041 LOC123112270 LOC123398976 LOC110432902 LOC100831289 CHLRE_03g207713v5
Function* isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3 isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase isoamylase 3, chloroplastic isoamylase 3, chloroplastic-like isoamylase-type starch debranching enzyme ISO3 isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 10
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 12
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 7
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 8
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 6
zma00061 Fatty acid biosynthesis 3
zma00620 Pyruvate metabolism 3
zma01212 Fatty acid metabolism 3
zma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 13
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00030 Pentose phosphate pathway 4
cre00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957785 107905084 826481 103858505 106438474 106435675 102616082 100807545 100806342 100255802 7467181 11434670 101261524 102577824 107771936 4347328 542095 123104041 123112270 123398976 110432902 100831289 5725004
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