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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107905201   transcription factor bHLH93 
 ath-u.5   bHLH093   beta HLH protein 93 
 gma-u.5   100784380   transcription factor bHLH93-like 
 gma-u.5   100806571   transcription factor bHLH93 
 vvi-u.5   100267616   transcription factor bHLH93 
 ppo-u.5   7461834   transcription factor bHLH93 
 mtr-u.5   11409352   transcription factor bHLH93 
 mtr-u.5   112416762   transcription factor bHLH93-like 
 mtr-u.5   11423511   transcription factor bHLH93 
 sly-u.5   101251240   transcription factor bHLH93-like 
 sly-u.5   101250473   transcription factor bHLH93 
 zma-u.5   100276548   uncharacterized LOC100276548 

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Top 50 coexpressed genes to 107905201 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107905201 (ghi-r.1 coexpression data)

CoexMap"107905201"


ghiLOC107905201 | Entrez gene ID : 107905201    
Species ghi ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi osa sot nta cre tae
Paralog 1 1 2 1 1 3 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016687282.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016687282.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016687282.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107905201
ath-u.5
for
bHLH093
gma-u.5
for
100784380
gma-u.5
for
100806571
vvi-u.5
for
100267616
ppo-u.5
for
7461834
mtr-u.5
for
11409352
mtr-u.5
for
112416762
mtr-u.5
for
11423511
sly-u.5
for
101251240
sly-u.5
for
101250473
zma-u.5
for
100276548


Ortholog ID: 2101
Species ghi ghi ath bra bra bna bna cit gma gma ppo mtr mtr sly sly sot sot nta nta zma hvu hvu
Symbol LOC107921665 LOC107957853 bHLH093 LOC103846794 LOC103855309 LOC106347821 LOC106348110 LOC102626641 LOC100784145 LOC100812578 LOC7461834 LOC11423511 LOC11409352 LOC101262198 LOC101251240 LOC102596640 LOC102597520 LOC107820556 LOC107832367 LOC100276548 LOC123407711 LOC123443375
Function* transcription factor bHLH93 transcription factor bHLH93 beta HLH protein 93 transcription factor bHLH61 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH61 transcription factor bHLH93-like transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 NO FLOWERING IN SHORT DAY-like transcription factor transcription factor bHLH93-like transcription factor bHLH93-like transcription factor bHLH93-like transcription factor bHLH93-like transcription factor bHLH93-like uncharacterized LOC100276548 transcription factor BHLH3-like transcription factor bHLH93-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00100 Steroid biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 2
ppo00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00785 Lipoic acid metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921665 107957853 836690 103846794 103855309 106347821 106348110 102626641 100784145 100812578 7461834 11423511 11409352 101262198 101251240 102596640 102597520 107820556 107832367 100276548 123407711 123443375
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