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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107905374   50S ribosomal protein L34, chloroplastic 
 ath-u.5   AT1G29070   Ribosomal protein L34 
 gma-u.5   100500433   50S ribosomal protein L34 
 gma-u.5   100526907   50S ribosomal protein L34 
 vvi-u.5   100258321   large ribosomal subunit protein bL34c 
 ppo-u.5   7455917   50S ribosomal protein L34, chloroplastic 
 mtr-u.5   11423417   50S ribosomal protein L34, chloroplastic 
 sly-u.5   101259190   large ribosomal subunit protein bL34c 
 osa-u.5   4327541   large ribosomal subunit protein bL34c 
 zma-u.5   100282969   50S ribosomal protein L34-like 

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Top 50 coexpressed genes to 107905374 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107905374 (ghi-r.1 coexpression data)

CoexMap"107905374"


ghiLOC107905374 | Entrez gene ID : 107905374    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016687506.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4,  nucl 1  (predict for XP_016687506.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016687506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107905374
ath-u.5
for
AT1G29070
gma-u.5
for
100500433
gma-u.5
for
100526907
vvi-u.5
for
100258321
ppo-u.5
for
7455917
mtr-u.5
for
11423417
sly-u.5
for
101259190
osa-u.5
for
4327541
zma-u.5
for
100282969


Ortholog ID: 6722
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC107901732 LOC107905374 AT1G29070 LOC103835300 LOC111204687 LOC106358617 LOC102617030 LOC100526907 LOC100500433 LOC100258321 LOC7455917 LOC11423417 LOC101259190 LOC102588229 LOC107804469 LOC107775341 LOC4327541 LOC100282969 LOC123079472 LOC123062334 LOC123444633 LOC110434129 LOC100845574 LOC100840922 CHLRE_01g030050v5
Function* 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic Ribosomal protein L34 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic-like 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34 50S ribosomal protein L34 large ribosomal subunit protein bL34c 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic large ribosomal subunit protein bL34c 50S ribosomal protein L34, chloroplastic large ribosomal subunit protein bL34c-like large ribosomal subunit protein bL34c large ribosomal subunit protein bL34c 50S ribosomal protein L34-like 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901732 107905374 839781 103835300 111204687 106358617 102617030 100526907 100500433 100258321 7455917 11423417 101259190 102588229 107804469 107775341 4327541 100282969 123079472 123062334 123444633 110434129 100845574 100840922 5715359
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