ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107905677	uncharacterized LOC107905677
ath-u.5	AT3G25030	RING/U-box superfamily protein
ath-u.5	AT4G13100	RING/U-box superfamily protein
gma-u.5	100802736	E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8
gma-u.5	100804292	death-associated inhibitor of apoptosis 1
gma-u.5	100804959	uncharacterized LOC100804959
ppo-u.5	7468527	uncharacterized LOC7468527
ppo-u.5	7458284	uncharacterized LOC7458284
mtr-u.5	11434492	zinc-binding protein A33
mtr-u.5	11446421	death-associated inhibitor of apoptosis 1
mtr-u.5	11438347	uncharacterized LOC11438347
sly-u.5	101254727	uncharacterized LOC101254727
sly-u.5	104645789	uncharacterized LOC104645789
osa-u.5	4324357	uncharacterized LOC4324357
osa-u.5	9267854	uncharacterized LOC9267854
zma-u.5	100381751	putative RING zinc finger domain superfamily protein
zma-u.5	103636359	uncharacterized LOC103636359

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040969611.1 [sequence] [blastp]
XP_040969612.1 [sequence] [blastp]
XP_040969613.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, mito 4, chlo 1	(predict for XP_040969611.1)
mito 4, chlo 2, cyto 2, nucl 1, cyto_mito 1, mito_plas 1	(predict for XP_040969612.1)
mito 4, chlo 3, cyto 1, nucl 1, extr 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_040969613.1)

Subcellular
localization
TargetP

other 5, mito 4	(predict for XP_040969611.1)
other 7, mito 6	(predict for XP_040969612.1)
other 7, mito 5	(predict for XP_040969613.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107905677	ath-u.5 for AT3G25030	ath-u.5 for AT4G13100	gma-u.5 for 100802736	gma-u.5 for 100804292	gma-u.5 for 100804959	ppo-u.5 for 7468527	ppo-u.5 for 7458284	mtr-u.5 for 11434492	mtr-u.5 for 11446421	mtr-u.5 for 11438347	sly-u.5 for 101254727	sly-u.5 for 104645789	osa-u.5 for 4324357	osa-u.5 for 9267854	zma-u.5 for 100381751	zma-u.5 for 103636359

Ortholog

Ortholog ID: 1862

Species

ghi

ath

bra

bna

cit

gma

ppo

mtr

sly

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107923254

E3 ubiquitin-protein ligase ORTHRUS 2

RING/U-box superfamily protein

putative E3 ubiquitin-protein ligase XBAT35

death-associated inhibitor of apoptosis 1

putative E3 ubiquitin-protein ligase XBAT35

E3 ubiquitin-protein ligase bre1-like

uncharacterized LOC100792613

E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8

uncharacterized LOC7458284

uncharacterized LOC11438347

death-associated inhibitor of apoptosis 1

uncharacterized LOC101254727

uncharacterized LOC104645789

uncharacterized LOC107769689

uncharacterized LOC4324357

uncharacterized LOC9267854

putative RING zinc finger domain superfamily protein

uncharacterized LOC103636359

uncharacterized LOC123440686

uncharacterized LOC8054775

E3 ubiquitin-protein ligase RNF19B-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00310	Lysine degradation	3
ath00260	Glycine, serine and threonine metabolism	2
ath00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	6
gma00330	Arginine and proline metabolism	2
gma00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	5
mtr04075	Plant hormone signal transduction	5
mtr00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00270	Cysteine and methionine metabolism	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

107923254

107905895

842535

826924

103828589

106391300

106434829

102613521

100792613

100819018

7458284

11438347

11446421

101254727

104645789

107769689

4324357

9267854

100381751

103636359

123440686

8054775

100842680

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107905677 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107905677 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	vvi	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	3	2	3	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107905677 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107905677 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**