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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107906496   aromatic aminotransferase ISS1 
 ghi-r.1   107940966   aromatic aminotransferase ISS1 
 ath-u.5   AT1G80360   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 bra-r.6   103830431   aromatic aminotransferase ISS1 
 bra-r.6   103832493   aromatic aminotransferase ISS1 
 bra-r.6   103853264   aromatic aminotransferase ISS1 
 bna-r.1   125576419   aromatic aminotransferase ISS1-like 
 bna-r.1   125581660   aromatic aminotransferase ISS1 
 bna-r.1   106449504   aromatic aminotransferase ISS1 
 cit-r.1   102629708   aromatic aminotransferase ISS1 
 gma-u.5   100776219   aromatic aminotransferase ISS1 
 gma-u.5   100803887   aromatic aminotransferase ISS1-like 
 vvi-u.5   100255998   aromatic aminotransferase ISS1 
 vvi-u.5   100248010   aromatic aminotransferase ISS1 
 ppo-u.5   7490978   aromatic aminotransferase ISS1 
 mtr-u.5   25491374   aromatic aminotransferase ISS1 
 sly-u.5   101244469   aminotransferase 
 sot-r.1   102598122   aspartate aminotransferase 
 nta-r.1   107800136   aromatic aminotransferase ISS1 
 nta-r.1   107763688   aromatic aminotransferase ISS1 
 osa-u.5   4323866   aromatic aminotransferase ISS1 
 zma-u.5   100193293   transaminase/ transferase 
 zma-u.5   100285201   LL-diaminopimelate aminotransferase 
 tae-r.2   123077557   aromatic aminotransferase ISS1 
 tae-r.2   123069030   aromatic aminotransferase ISS1 
 tae-r.2   123060482   aromatic aminotransferase ISS1 
 hvu-r.1   123443004   aromatic aminotransferase ISS1 
 sbi-r.1   110433996   aspartate aminotransferase 
 bdi-r.1   100840219   aromatic aminotransferase ISS1 
 cre-r.1   CHLRE_01g051800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107906496 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107906496 (ghi-r.1 coexpression data)

CoexMap"107906496"


ghiLOC107906496 | Entrez gene ID : 107906496    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 3 3 1 2 2 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
ghi00380 [list] [network] Tryptophan metabolism (147 genes)
GO BP
GO:0009058 [list] [network] biosynthetic process  (7227 genes)  IEA  
GO CC
GO MF
GO:0030170 [list] [network] pyridoxal phosphate binding  (218 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (20761 genes)  IEA  
Protein XP_016688990.1 [sequence] [blastp]
XP_016688991.1 [sequence] [blastp]
XP_016688992.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  pero 1,  cysk 1,  cysk_nucl 1  (predict for XP_016688990.1)
cyto 7,  chlo 1,  nucl 1,  pero 1,  cysk 1,  cysk_nucl 1  (predict for XP_016688991.1)
cyto 7,  chlo 1,  nucl 1,  pero 1,  cysk 1,  cysk_nucl 1  (predict for XP_016688992.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_016688990.1)
other 7,  mito 4  (predict for XP_016688991.1)
other 7,  mito 4  (predict for XP_016688992.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107906496
ghi-r.1
for
107940966
ath-u.5
for
AT1G80360
bra-r.6
for
103830431
bra-r.6
for
103832493
bra-r.6
for
103853264
bna-r.1
for
125576419
bna-r.1
for
125581660
bna-r.1
for
106449504
cit-r.1
for
102629708
gma-u.5
for
100776219
gma-u.5
for
100803887
vvi-u.5
for
100255998
vvi-u.5
for
100248010
ppo-u.5
for
7490978
mtr-u.5
for
25491374
sly-u.5
for
101244469
sot-r.1
for
102598122
nta-r.1
for
107800136
nta-r.1
for
107763688
osa-u.5
for
4323866
zma-u.5
for
100193293
zma-u.5
for
100285201
tae-r.2
for
123077557
tae-r.2
for
123069030
tae-r.2
for
123060482
hvu-r.1
for
123443004
sbi-r.1
for
110433996
bdi-r.1
for
100840219
cre-r.1
for
CHLRE_01g051800v5


Ortholog ID: 6165
Species ghi ghi ath bra bra bra bna bna bna cit gma gma vvi vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107906496 LOC107940966 AT1G80360 LOC103830431 LOC103832493 LOC103853264 LOC125581660 LOC106374745 LOC106398520 LOC102629708 LOC100776219 LOC100803887 LOC100255998 LOC100248010 LOC7490978 LOC25491374 LOC101244469 LOC102598122 LOC107800136 LOC107763688 LOC4323866 LOC100193293 LOC100285201 LOC123077557 LOC123069030 LOC123060482 LOC123443004 LOC110433996 LOC100840219 CHLRE_01g051800v5
Function* aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1-like aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aminotransferase aspartate aminotransferase aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 transaminase/ transferase LL-diaminopimelate aminotransferase aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aromatic aminotransferase ISS1 aspartate aminotransferase aromatic aminotransferase ISS1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
ath01230 Biosynthesis of amino acids 6
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 8
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00380 Tryptophan metabolism 7
bna00430 Taurine and hypotaurine metabolism 2
bna00460 Cyanoamino acid metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00380 Tryptophan metabolism 7
bna00430 Taurine and hypotaurine metabolism 2
bna00460 Cyanoamino acid metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00380 Tryptophan metabolism 7
bna00430 Taurine and hypotaurine metabolism 2
bna00460 Cyanoamino acid metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
cit00380 Tryptophan metabolism 2
cit00620 Pyruvate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00280 Valine, leucine and isoleucine degradation 3
gma00190 Oxidative phosphorylation 2
gma01230 Biosynthesis of amino acids 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00380 Tryptophan metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00190 Oxidative phosphorylation 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo00280 Valine, leucine and isoleucine degradation 2
ppo04146 Peroxisome 2
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 3
mtr00190 Oxidative phosphorylation 3
mtr01200 Carbon metabolism 3
mtr00270 Cysteine and methionine metabolism 3
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 4
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00350 Tyrosine metabolism 2
sly00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
zma01230 Biosynthesis of amino acids 3
zma00270 Cysteine and methionine metabolism 2
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 5
tae00030 Pentose phosphate pathway 4
tae01200 Carbon metabolism 4
tae00480 Glutathione metabolism 4
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 5
tae00030 Pentose phosphate pathway 4
tae01200 Carbon metabolism 4
tae00480 Glutathione metabolism 4
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae00030 Pentose phosphate pathway 4
tae01200 Carbon metabolism 4
tae00480 Glutathione metabolism 4
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 6
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00270 Cysteine and methionine metabolism 2
cre00020 Citrate cycle (TCA cycle) 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906496 107940966 844376 103830431 103832493 103853264 125581660 106374745 106398520 102629708 100776219 100803887 100255998 100248010 7490978 25491374 101244469 102598122 107800136 107763688 4323866 100193293 100285201 123077557 123069030 123060482 123443004 110433996 100840219 5715765
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