ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107906601	laccase-4
ghi-r.1	107951488	laccase-22
ghi-r.1	107886050	laccase-4
ghi-r.1	107892568	laccase-4
ath-u.5	IRX12	Laccase/Diphenol oxidase family protein
ath-u.5	LAC10	laccase 10
bra-r.6	103845315	laccase-16
bra-r.6	103850428	laccase-10
bra-r.6	103867139	laccase-4
bna-r.1	106402805	laccase-4
bna-r.1	106345514	laccase-22
bna-r.1	106354757	laccase-4
cit-r.1	102620940	laccase-4-like
cit-r.1	102610433	laccase-4
cit-r.1	102614350	laccase-4
gma-u.5	100806257	laccase-4
gma-u.5	100799138	laccase-4
gma-u.5	100797234	laccase-4
vvi-u.5	100267265	laccase-4
vvi-u.5	100247392	laccase-4
vvi-u.5	100240808	laccase-4
ppo-u.5	7466052	laccase-4
ppo-u.5	7468043	laccase-4
ppo-u.5	7468582	laccase-4
mtr-u.5	25490798	laccase-4
mtr-u.5	11419201	laccase-4
mtr-u.5	11409888	laccase-4
sly-u.5	101253311	laccase-4
sly-u.5	101250647	laccase-4-like
sot-r.1	102605934	laccase-4
sot-r.1	102588474	laccase-4-like
sot-r.1	102584179	laccase-4-like
nta-r.1	107771104	laccase-4-like
nta-r.1	107816409	laccase-4-like
nta-r.1	107815407	laccase-4-like
osa-u.5	9269875	laccase-22-like
hvu-r.1	123448225	laccase-22
bdi-r.1	100837611	laccase-22

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(87 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(189 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(87 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(202 genes)	IEA

Protein

XP_016689128.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for XP_016689128.2)

Subcellular
localization
TargetP

scret 9, mito 4

(predict for XP_016689128.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107906601	ghi-r.1 for 107951488	ghi-r.1 for 107886050	ghi-r.1 for 107892568	ath-u.5 for IRX12	ath-u.5 for LAC10	bra-r.6 for 103845315	bra-r.6 for 103850428	bra-r.6 for 103867139	bna-r.1 for 106402805	bna-r.1 for 106345514	bna-r.1 for 106354757	cit-r.1 for 102620940	cit-r.1 for 102610433	cit-r.1 for 102614350	gma-u.5 for 100806257	gma-u.5 for 100799138	gma-u.5 for 100797234	vvi-u.5 for 100267265	vvi-u.5 for 100247392	vvi-u.5 for 100240808	ppo-u.5 for 7466052	ppo-u.5 for 7468043	ppo-u.5 for 7468582	mtr-u.5 for 25490798	mtr-u.5 for 11419201	mtr-u.5 for 11409888	sly-u.5 for 101253311	sly-u.5 for 101250647	sot-r.1 for 102605934	sot-r.1 for 102588474	sot-r.1 for 102584179	nta-r.1 for 107771104	nta-r.1 for 107816409	nta-r.1 for 107815407	osa-u.5 for 9269875	hvu-r.1 for 123448225	bdi-r.1 for 100837611

Ortholog

Ortholog ID: 1494

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

hvu

bdi

Symbol

LOC107906601

LOC107960103

IRX12

LAC10

Function^*

laccase-4

laccase-22

Laccase/Diphenol oxidase family protein

laccase 10

laccase-4

laccase-22

laccase-4

laccase-22

laccase-4-like

laccase-4

laccase-4-like

laccase-4

laccase-4-like

laccase-4

laccase-22-like

laccase-4-like

laccase-22-like

laccase-22

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00071	Fatty acid degradation	2
nta00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00380	Tryptophan metabolism	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00071	Fatty acid degradation	2
bdi00350	Tyrosine metabolism	2
bdi00620	Pyruvate metabolism	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107906601

107960103

818386

831697

103867139

103870360

103865649

106345514

106447656

102620940

102610433

102614350

100797234

100779825

100786722

100267265

100247392

100240808

7468043

7468582

7478550

25490798

11419201

11406707

101253311

101250647

102605934

102588474

102583122

107811434

107802428

107779479

9269875

123448225

100837611

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107906601 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107906601 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	hvu	bdi	cre	zma	tae	sbi
Paralog	4	2	3	3	3	3	3	3	3	2	3	3	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107906601 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107906601 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**