ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G56960	basic helix-loop-helix (bHLH) DNA-binding family protein
gma-u.5	100807098	putative transcription factor bHLH041
gma-u.5	100798452	putative transcription factor bHLH041
vvi-u.5	100252681	putative transcription factor bHLH041
mtr-u.5	11445448	putative transcription factor bHLH041
sly-u.5	101244746	putative transcription factor bHLH041

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046983 [list] [network] protein dimerization activity

(1206 genes)

IEA

Protein

XP_016689874.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, cysk 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_016689874.1)

Subcellular
localization
TargetP

other 4, scret 4

(predict for XP_016689874.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G56960	gma-u.5 for 100807098	gma-u.5 for 100798452	vvi-u.5 for 100252681	mtr-u.5 for 11445448	sly-u.5 for 101244746

Ortholog ID: 4633

Species

ghi

ath

bra

bna

cit

gma

vvi

mtr

sly

sot

nta

tae

hvu

Symbol

Function^*

putative transcription factor bHLH041

basic helix-loop-helix (bHLH) DNA-binding family protein

putative transcription factor bHLH041

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00460	Cyanoamino acid metabolism	5
cit00966	Glucosinolate biosynthesis	5
cit01210	2-Oxocarboxylic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04626	Plant-pathogen interaction	4
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01040	Biosynthesis of unsaturated fatty acids	4
sot01212	Fatty acid metabolism	4
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	3

Expression

Expression pattern

Entrez Gene ID^*

107895811

835798

103851797

106418200

102614041

100807098

100252681

11445448

101244746

102590917

107766344

123148036

123171171

123407313

123404017

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G56960 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G56960 (ath-u.5 coexpression data)


Species	ath	gma	vvi	mtr	sly	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G56960 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G56960 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**