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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907499   nifU-like protein 3, chloroplastic 
 ath-u.5   NFU3   NFU domain protein 3 
 gma-u.5   100807119   nifU-like protein 3, chloroplastic 
 gma-u.5   100806364   nifU-like protein 3, chloroplastic 
 vvi-u.5   100266735   nifU-like protein 3, chloroplastic 
 ppo-u.5   18100475   nifU-like protein 3, chloroplastic 
 mtr-u.5   11437666   nifU-like protein 3, chloroplastic 
 sly-u.5   101247026   nifU-like protein 3, chloroplastic 
 osa-u.5   4341928   nifU-like protein 3, chloroplastic 
 zma-u.5   100284426   uncharacterized LOC100284426 

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Top 50 coexpressed genes to 107907499 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907499 (ghi-r.1 coexpression data)

CoexMap"107907499"


ghiLOC107907499 | Entrez gene ID : 107907499    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (65 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (302 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (90 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (898 genes)  IEA  
Protein XP_016690387.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016690387.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016690387.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907499

.
ath-u.5
for
NFU3

.
gma-u.5
for
100807119

.
gma-u.5
for
100806364

.
vvi-u.5
for
100266735

.
ppo-u.5
for
18100475

.
mtr-u.5
for
11437666

.
sly-u.5
for
101247026

.
osa-u.5
for
4341928

.
zma-u.5
for
100284426

.


Ortholog ID: 10881
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol NFU3 LOC100807119 LOC100806364 LOC101247026 LOC4341928 LOC100284426 LOC103863702 LOC100266735 LOC18100475 LOC11437666 LOC123164221 LOC123156612 LOC123413329 LOC107907354 LOC107907499 LOC106444658 LOC125580155 LOC8065122 LOC102586740 LOC102616867 LOC100833861 LOC107794202 LOC107759343
Function* NFU domain protein 3 nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic uncharacterized LOC100284426 nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 4
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit00710 Carbon fixation by Calvin cycle 5
cit00630 Glyoxylate and dicarboxylate metabolism 4
cit00195 Photosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828697 100807119 100806364 101247026 4341928 100284426 103863702 100266735 18100475 11437666 123164221 123156612 123413329 107907354 107907499 106444658 125580155 8065122 102586740 102616867 100833861 107794202 107759343
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