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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107924904  chaperonin-like RBCX protein 1, chloroplastic 
 ath-u.5  RbcX1  Chaperonin-like RbcX protein 
 bra-r.6  103839845  chaperonin-like RBCX protein 1, chloroplastic 
 bna-r.1  BNAA09G20510D  chaperonin-like RBCX protein 1, chloroplastic 
 bna-r.1  106366915  chaperonin-like RBCX protein 1, chloroplastic 
 bna-r.1  106366917  chaperonin-like RBCX protein 1, chloroplastic 
 cit-r.1  102616433  chaperonin-like RBCX protein 1, chloroplastic 
 gma-u.5  100820127  chaperonin-like RbcX protein 
 gma-u.5  100803175  uncharacterized LOC100803175 
 vvi-u.5  100252097  chaperonin-like RBCX protein 1, chloroplastic 
 ppo-u.5  7484541  chaperonin-like RBCX protein 1, chloroplastic 
 mtr-u.5  25486226  chaperonin-like RBCX protein 1, chloroplastic 
 sly-u.5  101245517  chaperonin-like RBCX protein 1, chloroplastic 
 sot-r.1  102580857  uncharacterized LOC102580857 
 nta-r.1  107783517  chaperonin-like RBCX protein 1, chloroplastic 
 nta-r.1  107827278  chaperonin-like RBCX protein 1, chloroplastic 
 osa-u.5  4345611  chaperonin-like RBCX protein 1, chloroplastic 
 zma-u.5  100277780  uncharacterized LOC100277780 
 tae-r.2  123154215  chaperonin-like RBCX protein 1, chloroplastic 
 tae-r.2  123158959  chaperonin-like RBCX protein 1, chloroplastic 
 tae-r.2  123165923  chaperonin-like RBCX protein 1, chloroplastic 
 hvu-r.1  123412353  chaperonin-like RBCX protein 1, chloroplastic 
 sbi-r.1  8075377  chaperonin-like RBCX protein 1, chloroplastic 
 bdi-r.1  100827998  chaperonin-like RBCX protein 1, chloroplastic 
 cre-r.1  CHLRE_01g030350v5  uncharacterized protein 
 cre-r.1  CHLRE_07g339000v5  uncharacterized protein 

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Top 50 coexpressed genes to 107924904 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924904 (ghi-r.1 coexpression data)

CoexMap"107908303"


ghiLOC107908303 | Entrez gene ID : 107908303
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0110102 [list] [network] ribulose bisphosphate carboxylase complex assembly  (7 genes)  IEA  
GO CC
GO MF
GO:0044183 [list] [network] protein folding chaperone  (181 genes)  IEA  
Protein XP_016691003.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 2,  cyto 1,  vacu 1  (predict for XP_016691003.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016691003.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107924904


ath-u.5
for
RbcX1


bra-r.6
for
103839845


bna-r.1
for
BNAA09G20510D


bna-r.1
for
106366915


bna-r.1
for
106366917


cit-r.1
for
102616433


gma-u.5
for
100820127


gma-u.5
for
100803175


vvi-u.5
for
100252097


ppo-u.5
for
7484541


mtr-u.5
for
25486226


sly-u.5
for
101245517


sot-r.1
for
102580857


nta-r.1
for
107783517


nta-r.1
for
107827278


osa-u.5
for
4345611


zma-u.5
for
100277780


tae-r.2
for
123154215


tae-r.2
for
123158959


tae-r.2
for
123165923


hvu-r.1
for
123412353


sbi-r.1
for
8075377


bdi-r.1
for
100827998


cre-r.1
for
CHLRE_01g030350v5


cre-r.1
for
CHLRE_07g339000v5



Ortholog ID: 8524
Species ghi ath bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC107924904 RbcX1 LOC103839845 BNAA09G20510D LOC106366915 LOC106366917 LOC102616433 LOC100820127 LOC100803175 LOC100252097 LOC7484541 LOC25486226 LOC101245517 LOC102580857 LOC107783517 LOC107827278 LOC4345611 LOC100277780 LOC123154215 LOC123158959 LOC123165923 LOC123412353 LOC8075377 LOC100827998 CHLRE_01g030350v5 CHLRE_07g339000v5
Function* chaperonin-like RBCX protein 1, chloroplastic Chaperonin-like RbcX protein chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RbcX protein uncharacterized LOC100803175 chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic uncharacterized LOC102580857 chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic uncharacterized LOC100277780 chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic chaperonin-like RBCX protein 1, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00650 Butanoate metabolism 2
tae01200 Carbon metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00650 Butanoate metabolism 2
tae01200 Carbon metabolism 2
tae00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00730 Thiamine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi00196 Photosynthesis - antenna proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924904 825753 103839845 106366132 106366915 106366917 102616433 100820127 100803175 100252097 7484541 25486226 101245517 102580857 107783517 107827278 4345611 100277780 123154215 123158959 123165923 123412353 8075377 100827998 5715365 5718088
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