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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107908505   acetate/butyrate--CoA ligase AAE7, peroxisomal 
 ghi-r.1   107892107   acetate/butyrate--CoA ligase AAE7, peroxisomal 
 ghi-r.1   107918265   probable acyl-activating enzyme 1, peroxisomal 
 ghi-r.1   107916951   trans-cinnamate:CoA ligase, peroxisomal 
 ath-u.5   AT2G17650   AMP-dependent synthetase and ligase family protein 
 bra-r.6   103845935   probable acyl-activating enzyme 2 
 bna-r.1   125587463   probable acyl-activating enzyme 5, peroxisomal 
 bna-r.1   106436870   isovalerate--CoA ligase AAE2-like 
 cit-r.1   102626647   acetate--CoA ligase CCL3-like 
 cit-r.1   102626941   acetate--CoA ligase CCL3-like 
 cit-r.1   102629834   2-methylpropanoate--CoA ligase CCL4-like 
 gma-u.5   100805943   probable acyl-activating enzyme 1, peroxisomal 
 gma-u.5   100808187   acetate/butyrate--CoA ligase AAE7, peroxisomal 
 vvi-u.5   100853691   isovalerate--CoA ligase CCL2 
 vvi-u.5   100853847   isovalerate--CoA ligase CCL2 
 ppo-u.5   7487416   trans-cinnamate:CoA ligase, peroxisomal 
 ppo-u.5   7494693   butanoate--CoA ligase AAE1 
 ppo-u.5   7458915   trans-cinnamate:CoA ligase, peroxisomal 
 mtr-u.5   11436191   probable acyl-activating enzyme 1, peroxisomal 
 mtr-u.5   25480516   probable acyl-activating enzyme 5, peroxisomal 
 mtr-u.5   11435332   probable acyl-activating enzyme 6 
 sly-u.5   101251107   butanoate--CoA ligase AAE1 
 sly-u.5   101254597   butanoate--CoA ligase AAE1-like 
 sly-u.5   112940025   trans-cinnamate:CoA ligase, peroxisomal-like 
 sot-r.1   102597052   probable acyl-activating enzyme 9 
 sot-r.1   102578388   probable acyl-activating enzyme 2 
 nta-r.1   107794978   butanoate--CoA ligase AAE1 
 nta-r.1   107810642   2-methylpropanoate--CoA ligase CCL4-like 
 osa-u.5   4332592   acetate--CoA ligase CCL3 
 osa-u.5   4332593   acetate--CoA ligase CCL3 
 osa-u.5   4337383   probable acyl-activating enzyme 6 
 zma-u.5   100383521   putative AMP-dependent synthetase and ligase superfamily protein 
 zma-u.5   100281397   acyl-activating enzyme 11 
 zma-u.5   100281193   uncharacterized LOC100281193 
 tae-r.2   123086607   trans-cinnamate:CoA ligase, peroxisomal 
 tae-r.2   123098898   butanoate--CoA ligase AAE1 
 hvu-r.1   123447289   butanoate--CoA ligase AAE1-like 
 hvu-r.1   123447330   trans-cinnamate:CoA ligase, peroxisomal-like 
 hvu-r.1   123448839   acetate--CoA ligase CCL3-like 
 sbi-r.1   8070317   probable acyl-activating enzyme 5, peroxisomal 
 sbi-r.1   8057412   probable acyl-activating enzyme 1, peroxisomal 
 sbi-r.1   8061436   benzoate--CoA ligase, peroxisomal 
 bdi-r.1   100835764   acetate/butyrate--CoA ligase AAE7, peroxisomal 
 bdi-r.1   100836068   acetate/butyrate--CoA ligase AAE7, peroxisomal 
 bdi-r.1   100831811   butyrate--CoA ligase AAE11, peroxisomal 
 cre-r.1   CHLRE_03g211745v5   uncharacterized protein 

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Top 50 coexpressed genes to 107908505 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107908505 (ghi-r.1 coexpression data)

CoexMap"107908505"


ghiLOC107908505 | Entrez gene ID : 107908505    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 3 2 2 3 3 3 2 2 3 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00010 [list] [network] Glycolysis / Gluconeogenesis (341 genes)
ghi00620 [list] [network] Pyruvate metabolism (290 genes)
ghi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (192 genes)
ghi00650 [list] [network] Butanoate metabolism (61 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO CC
GO MF
Protein XP_040945910.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  mito 1,  pero 1  (predict for XP_040945910.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040945910.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107908505
ghi-r.1
for
107892107
ghi-r.1
for
107918265
ghi-r.1
for
107916951
ath-u.5
for
AT2G17650
bra-r.6
for
103845935
bna-r.1
for
125587463
bna-r.1
for
106436870
cit-r.1
for
102626647
cit-r.1
for
102626941
cit-r.1
for
102629834
gma-u.5
for
100805943
gma-u.5
for
100808187
vvi-u.5
for
100853691
vvi-u.5
for
100853847
ppo-u.5
for
7487416
ppo-u.5
for
7494693
ppo-u.5
for
7458915
mtr-u.5
for
11436191
mtr-u.5
for
25480516
mtr-u.5
for
11435332
sly-u.5
for
101251107
sly-u.5
for
101254597
sly-u.5
for
112940025
sot-r.1
for
102597052
sot-r.1
for
102578388
nta-r.1
for
107794978
nta-r.1
for
107810642
osa-u.5
for
4332592
osa-u.5
for
4332593
osa-u.5
for
4337383
zma-u.5
for
100383521
zma-u.5
for
100281397
zma-u.5
for
100281193
tae-r.2
for
123086607
tae-r.2
for
123098898
hvu-r.1
for
123447289
hvu-r.1
for
123447330
hvu-r.1
for
123448839
sbi-r.1
for
8070317
sbi-r.1
for
8057412
sbi-r.1
for
8061436
bdi-r.1
for
100835764
bdi-r.1
for
100836068
bdi-r.1
for
100831811
cre-r.1
for
CHLRE_03g211745v5


Ortholog ID: 81
Species ghi ghi ghi ath ath bra bna bna bna cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107908127 LOC121214488 LOC107937797 AAE5 AT5G16340 LOC103853062 LOC125587463 LOC106436870 LOC106347269 LOC102620431 LOC102625563 LOC102626351 LOC100805943 LOC100792077 LOC100779323 LOC100853847 LOC100244843 LOC7494693 LOC7471118 LOC18101069 LOC11435332 LOC11442734 LOC11440944 LOC101251107 LOC101250819 LOC101265715 LOC102586127 LOC102579729 LOC107794978 LOC107806213 LOC107795472 LOC4332592 LOC4331525 LOC4331524 LOC100383521 LOC103639585 LOC100281089 LOC123086607 LOC123098898 LOC123448839 LOC123448840 LOC123428366 LOC8057412 LOC8083998 LOC8083997 LOC100831811 LOC100846880 LOC100822585 CHLRE_03g211745v5
Function* acetate/butyrate--CoA ligase AAE7, peroxisomal acetate/butyrate--CoA ligase AAE7, peroxisomal probable acyl-activating enzyme 1, peroxisomal acyl activating enzyme 5 AMP-dependent synthetase and ligase family protein probable acyl-activating enzyme 4 probable acyl-activating enzyme 5, peroxisomal isovalerate--CoA ligase AAE2-like butanoate--CoA ligase AAE1 2-methylpropanoate--CoA ligase CCL4-like isovalerate--CoA ligase CCL2-like acetate--CoA ligase CCL3 probable acyl-activating enzyme 1, peroxisomal probable acyl-activating enzyme 1, peroxisomal probable acyl-activating enzyme 5, peroxisomal isovalerate--CoA ligase CCL2 acetate--CoA ligase CCL3 butanoate--CoA ligase AAE1 acetate--CoA ligase CCL3 butanoate--CoA ligase AAE1 probable acyl-activating enzyme 6 probable acyl-activating enzyme 2 probable acyl-activating enzyme 1, peroxisomal butanoate--CoA ligase AAE1 butanoate--CoA ligase AAE1-like acetate--CoA ligase CCL3 probable acyl-activating enzyme 1, peroxisomal probable acyl-activating enzyme 1, peroxisomal butanoate--CoA ligase AAE1 butanoate--CoA ligase AAE1-like 2-methylpropanoate--CoA ligase CCL4-like acetate--CoA ligase CCL3 probable acyl-activating enzyme 1, peroxisomal butanoate--CoA ligase AAE1 putative AMP-dependent synthetase and ligase superfamily protein probable acyl-activating enzyme 12, peroxisomal uncharacterized LOC100281089 trans-cinnamate:CoA ligase, peroxisomal butanoate--CoA ligase AAE1 acetate--CoA ligase CCL3-like acetate--CoA ligase CCL3-like 2-methylpropanoate--CoA ligase CCL4-like probable acyl-activating enzyme 1, peroxisomal acetate/butyrate--CoA ligase AAE7, peroxisomal acetate/butyrate--CoA ligase AAE7, peroxisomal butyrate--CoA ligase AAE11, peroxisomal probable acyl-activating enzyme 5, peroxisomal probable acyl-activating enzyme 1, peroxisomal uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 7
ghi00620 Pyruvate metabolism 7
ghi00630 Glyoxylate and dicarboxylate metabolism 7
ghi00650 Butanoate metabolism 7
ghi01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 7
ghi00620 Pyruvate metabolism 7
ghi00630 Glyoxylate and dicarboxylate metabolism 7
ghi00650 Butanoate metabolism 7
ghi01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath00640 Propanoate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath00785 Lipoic acid metabolism 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00195 Photosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 3
cit00920 Sulfur metabolism 2
cit01320 Sulfur cycle 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi00900 Terpenoid backbone biosynthesis 2
vvi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 3
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00620 Pyruvate metabolism 2
ppo00410 beta-Alanine metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
sly01200 Carbon metabolism 3
sly00620 Pyruvate metabolism 2
sly00053 Ascorbate and aldarate metabolism 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot00020 Citrate cycle (TCA cycle) 3
sot01200 Carbon metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 3
nta00780 Biotin metabolism 3
nta01212 Fatty acid metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00750 Vitamin B6 metabolism 3
osa00900 Terpenoid backbone biosynthesis 3
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00511 Other glycan degradation 3
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma01200 Carbon metabolism 3
zma00620 Pyruvate metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00620 Pyruvate metabolism 3
hvu00280 Valine, leucine and isoleucine degradation 3
hvu01200 Carbon metabolism 2
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 4
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
bdi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107908127 121214488 107937797 831498 831495 103853062 125587463 106436870 106347269 102620431 102625563 102626351 100805943 100792077 100779323 100853847 100244843 7494693 7471118 18101069 11435332 11442734 11440944 101251107 101250819 101265715 102586127 102579729 107794978 107806213 107795472 4332592 4331525 4331524 100383521 103639585 100281089 123086607 123098898 123448839 123448840 123428366 8057412 8083998 8083997 100831811 100846880 100822585 5724963
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