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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107908856   pentatricopeptide repeat-containing protein At5g02860 
 ath-u.5   AT5G02860   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100813079   pentatricopeptide repeat-containing protein At5g02860 
 gma-u.5   100796014   pentatricopeptide repeat-containing protein At5g02860 
 vvi-u.5   100257649   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478642   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478722   pentatricopeptide repeat-containing protein At5g02860 
 mtr-u.5   25488998   pentatricopeptide repeat-containing protein At5g02860 
 sly-u.5   101245210   pentatricopeptide repeat-containing protein 
 osa-u.5   4343774   pentatricopeptide repeat-containing protein At5g02860 
 zma-u.5   103633383   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107908856 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107908856 (ghi-r.1 coexpression data)

CoexMap"107908856"


ghiLOC107908856 | Entrez gene ID : 107908856    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040958034.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_040958034.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_040958034.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107908856

.
ath-u.5
for
AT5G02860

.
gma-u.5
for
100813079

.
gma-u.5
for
100796014

.
vvi-u.5
for
100257649

.
ppo-u.5
for
7478642

.
ppo-u.5
for
7478722

.
mtr-u.5
for
25488998

.
sly-u.5
for
101245210

.
osa-u.5
for
4343774

.
zma-u.5
for
103633383

.


Ortholog ID: 10307
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G02860 LOC100813079 LOC100796014 LOC101245210 LOC4343774 LOC103633383 LOC103833941 LOC100257649 LOC7478642 LOC7478722 LOC25488998 LOC123044357 LOC123052231 LOC123425479 LOC107907719 LOC107908856 LOC106360937 LOC111207868 LOC8078985 LOC102593457 LOC102617122 LOC100828364 LOC107768112 LOC107771589
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 uncharacterized LOC107768112 uncharacterized LOC107771589
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
gma00500 Starch and sucrose metabolism 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot00920 Sulfur metabolism 3
sot03040 Spliceosome 2
sot00270 Cysteine and methionine metabolism 2
sot00543 Exopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831761 100813079 100796014 101245210 4343774 103633383 103833941 100257649 7478642 7478722 25488998 123044357 123052231 123425479 107907719 107908856 106360937 111207868 8078985 102593457 102617122 100828364 107768112 107771589
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