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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909250   putative pentatricopeptide repeat-containing protein At1g03510 
 ghi-r.1   107886743   putative pentatricopeptide repeat-containing protein At1g03510 
 ath-u.5   AT1G03510   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103836690   putative pentatricopeptide repeat-containing protein At1g03510 
 vvi-u.5   100248660   putative pentatricopeptide repeat-containing protein At1g03510 
 mtr-u.5   25486855   putative pentatricopeptide repeat-containing protein At1g03510 
 nta-r.1   107765636   putative pentatricopeptide repeat-containing protein At1g03510 
 nta-r.1   107798475   putative pentatricopeptide repeat-containing protein At1g03510 
 osa-u.5   9270768   putative pentatricopeptide repeat-containing protein At1g03510 
 bdi-r.1   100843616   putative pentatricopeptide repeat-containing protein At1g03510 

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Top 50 coexpressed genes to 107909250 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909250 (ghi-r.1 coexpression data)

CoexMap"107909250"


ghiLOC107909250 | Entrez gene ID : 107909250    
Species ghi ath bra vvi mtr nta osa bdi sot cit tae ppo sly zma hvu sbi cre gma bna
Paralog 2 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016692206.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_016692206.2)
Subcellular
localization
TargetP
mito 3  (predict for XP_016692206.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909250
ghi-r.1
for
107886743
ath-u.5
for
AT1G03510
bra-r.6
for
103836690
vvi-u.5
for
100248660
mtr-u.5
for
25486855
nta-r.1
for
107765636
nta-r.1
for
107798475
osa-u.5
for
9270768
bdi-r.1
for
100843616


Ortholog ID: 12030
Species ghi ghi ath bra vvi mtr nta nta osa bdi
Symbol LOC107909250 LOC107886743 AT1G03510 LOC103836690 LOC100248660 LOC25486855 LOC107765636 LOC107798475 LOC9270768 LOC100843616
Function* putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909250 107886743 839478 103836690 100248660 25486855 107765636 107798475 9270768 100843616
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