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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909992   ribosomal RNA small subunit methyltransferase 
 ath-u.5   DIM1A   Ribosomal RNA adenine dimethylase family protein 
 gma-u.5   100819707   S-adenosylmethionine-dependent methyltransferases superfamily protein 
 gma-u.5   100786901   ribosomal RNA small subunit methyltransferase 
 vvi-u.5   100245295   ribosomal RNA small subunit methyltransferase 
 ppo-u.5   7491259   ribosomal RNA small subunit methyltransferase 
 mtr-u.5   25491093   ribosomal RNA small subunit methyltransferase 
 mtr-u.5   11410499   ribosomal RNA small subunit methyltransferase 
 sly-u.5   101247757   ribosomal RNA small subunit methyltransferase 
 osa-u.5   4348215   ribosomal RNA small subunit methyltransferase 
 zma-u.5   100284053   uncharacterized LOC100284053 

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Top 50 coexpressed genes to 107909992 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909992 (ghi-r.1 coexpression data)

CoexMap"107909992"


ghiLOC107909992 | Entrez gene ID : 107909992    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031167 [list] [network] rRNA methylation  (55 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO MF
GO:0000179 [list] [network] rRNA (adenine-N6,N6-)-dimethyltransferase activity  (6 genes)  IEA  
Protein XP_016693211.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_016693211.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016693211.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909992
ath-u.5
for
DIM1A
gma-u.5
for
100819707
gma-u.5
for
100786901
vvi-u.5
for
100245295
ppo-u.5
for
7491259
mtr-u.5
for
25491093
mtr-u.5
for
11410499
sly-u.5
for
101247757
osa-u.5
for
4348215
zma-u.5
for
100284053


Ortholog ID: 6532
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107909992 LOC107954362 DIM1A LOC103866382 LOC103858246 LOC106404480 LOC106438329 LOC102628306 LOC100786901 LOC100819707 LOC100245295 LOC7491259 LOC11410499 LOC25491093 LOC101247757 LOC102605279 LOC107768427 LOC107821695 LOC4348215 LOC100284053 LOC123165446 LOC123147809 LOC123407875 LOC8076138 LOC100829299 CHLRE_01g042900v5
Function* ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase Ribosomal RNA adenine dimethylase family protein ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase S-adenosylmethionine-dependent methyltransferases superfamily protein ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase-like ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase uncharacterized LOC100284053 ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase ribosomal RNA small subunit methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909992 107954362 819355 103866382 103858246 106404480 106438329 102628306 100786901 100819707 100245295 7491259 11410499 25491093 101247757 102605279 107768427 107821695 4348215 100284053 123165446 123147809 123407875 8076138 100829299 5715604
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