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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910903   peroxisome biogenesis protein 3-2 
 ghi-r.1   107888798   peroxisome biogenesis protein 3-2 
 ghi-r.1   107945841   peroxisome biogenesis protein 3-2 
 ath-u.5   PEX3-1   peroxin 3-1 
 ath-u.5   PEX3   peroxin 3 
 bra-r.6   103838793   peroxisome biogenesis protein 3-1 
 bra-r.6   103859742   peroxisome biogenesis protein 3-1 
 bra-r.6   103871454   peroxisome biogenesis protein 3-2 
 bna-r.1   111216221   peroxisome biogenesis protein 3-2 
 bna-r.1   106439560   peroxisome biogenesis protein 3-1-like 
 bna-r.1   106389047   peroxisome biogenesis protein 3-1-like 
 cit-r.1   102608864   peroxisome biogenesis protein 3-2 
 gma-u.5   100782816   peroxisome biogenesis protein 3-2 
 gma-u.5   100778748   peroxisome biogenesis protein 3-2 
 vvi-u.5   100243874   peroxisome biogenesis protein 3-2 
 vvi-u.5   104882355   peroxisome biogenesis protein 3-2 
 ppo-u.5   7462474   peroxisome biogenesis protein 3-2 
 ppo-u.5   7493501   peroxisome biogenesis protein 3-1 
 mtr-u.5   11411176   peroxisome biogenesis protein 3-2 
 sly-u.5   101251367   peroxisome biogenesis protein 3-2 
 sly-u.5   101245440   peroxisome biogenesis protein 3-2 
 sot-r.1   102606031   peroxisome biogenesis protein 3-2 
 sot-r.1   102578667   peroxisome biogenesis protein 3-2-like 
 nta-r.1   107784676   peroxisome biogenesis protein 3-2 
 nta-r.1   107795917   peroxisome biogenesis protein 3-2-like 
 nta-r.1   107784631   peroxisome biogenesis protein 3-2 
 osa-u.5   4346691   peroxisome biogenesis protein 3-1 
 zma-u.5   100273992   lysine and histidine specific transporter 
 zma-u.5   103633997   peroxisome biogenesis protein 3-1 
 tae-r.2   123119097   peroxisome biogenesis protein 3-2 
 tae-r.2   123110094   peroxisome biogenesis protein 3-2 
 tae-r.2   123101981   peroxisome biogenesis protein 3-2 
 hvu-r.1   123395417   peroxisome biogenesis protein 3-1-like 
 sbi-r.1   8065468   peroxisome biogenesis protein 3-2 
 bdi-r.1   100830466   peroxisome biogenesis protein 3-1 

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Top 50 coexpressed genes to 107910903 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910903 (ghi-r.1 coexpression data)

CoexMap"107910903"


ghiLOC107910903 | Entrez gene ID : 107910903    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 1 2 2 2 1 2 2 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04146 [list] [network] Peroxisome (210 genes)
GO BP
GO:0045046 [list] [network] protein import into peroxisome membrane  (8 genes)  IEA  
GO CC
GO:0005778 [list] [network] peroxisomal membrane  (87 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (501 genes)  IEA  
Protein XP_040954139.1 [sequence] [blastp]
XP_040954140.1 [sequence] [blastp]
XP_040954141.1 [sequence] [blastp]
XP_040954142.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  mito 1,  golg 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040954139.1)
nucl 3,  cyto 2,  mito 1,  golg 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040954140.1)
nucl 3,  cyto 2,  mito 1,  golg 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040954141.1)
nucl 3,  cyto 2,  mito 1,  golg 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040954142.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_040954139.1)
mito 9  (predict for XP_040954140.1)
mito 9  (predict for XP_040954141.1)
mito 9  (predict for XP_040954142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910903
ghi-r.1
for
107888798
ghi-r.1
for
107945841
ath-u.5
for
PEX3-1
ath-u.5
for
PEX3
bra-r.6
for
103838793
bra-r.6
for
103859742
bra-r.6
for
103871454
bna-r.1
for
111216221
bna-r.1
for
106439560
bna-r.1
for
106389047
cit-r.1
for
102608864
gma-u.5
for
100782816
gma-u.5
for
100778748
vvi-u.5
for
100243874
vvi-u.5
for
104882355
ppo-u.5
for
7462474
ppo-u.5
for
7493501
mtr-u.5
for
11411176
sly-u.5
for
101251367
sly-u.5
for
101245440
sot-r.1
for
102606031
sot-r.1
for
102578667
nta-r.1
for
107784676
nta-r.1
for
107795917
nta-r.1
for
107784631
osa-u.5
for
4346691
zma-u.5
for
100273992
zma-u.5
for
103633997
tae-r.2
for
123119097
tae-r.2
for
123110094
tae-r.2
for
123101981
hvu-r.1
for
123395417
sbi-r.1
for
8065468
bdi-r.1
for
100830466


Ortholog ID: 5112
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107910903 LOC107888798 LOC107945841 PEX3-1 PEX3 LOC103838793 LOC103859742 LOC103871454 LOC111216221 LOC106389047 LOC106382094 LOC102608864 LOC100782816 LOC100778748 LOC100243874 LOC104882355 LOC7462474 LOC7493501 LOC11411176 LOC101251367 LOC101245440 LOC102606031 LOC102578667 LOC107795917 LOC107784631 LOC107763848 LOC4346691 LOC100273992 LOC103633997 LOC123119097 LOC123110094 LOC123101981 LOC123395417 LOC8065468 LOC100830466
Function* peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxin 3-1 peroxin 3 peroxisome biogenesis protein 3-1 peroxisome biogenesis protein 3-1 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-1-like peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-1 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2-like peroxisome biogenesis protein 3-2-like peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2-like peroxisome biogenesis protein 3-1 lysine and histidine specific transporter peroxisome biogenesis protein 3-1 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-1-like peroxisome biogenesis protein 3-2 peroxisome biogenesis protein 3-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 3
ghi03040 Spliceosome 3
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03040 Spliceosome 4
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00910 Nitrogen metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03013 Nucleocytoplasmic transport 2
bra03250 Viral life cycle - HIV-1 2
bra03040 Spliceosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
bna00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna03018 RNA degradation 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03250 Viral life cycle - HIV-1 2
gma04146 Peroxisome 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
gma03015 mRNA surveillance pathway 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03050 Proteasome 3
ppo03013 Nucleocytoplasmic transport 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly04141 Protein processing in endoplasmic reticulum 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta00620 Pyruvate metabolism 2
nta00350 Tyrosine metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 4
nta01240 Biosynthesis of cofactors 4
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 12
tae04148 Efferocytosis 5
tae04146 Peroxisome 3
tae00020 Citrate cycle (TCA cycle) 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
tae04148 Efferocytosis 5
tae04146 Peroxisome 3
tae03082 ATP-dependent chromatin remodeling 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 12
tae04148 Efferocytosis 5
tae04146 Peroxisome 3
tae00020 Citrate cycle (TCA cycle) 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi03050 Proteasome 2
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107910903 107888798 107945841 821342 841285 103838793 103859742 103871454 111216221 106389047 106382094 102608864 100782816 100778748 100243874 104882355 7462474 7493501 11411176 101251367 101245440 102606031 102578667 107795917 107784631 107763848 4346691 100273992 103633997 123119097 123110094 123101981 123395417 8065468 100830466
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