ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107912284	uncharacterized LOC107912284
ghi-r.1	107945630	uncharacterized LOC107945630
ghi-r.1	107925219	uncharacterized LOC107925219
ghi-r.1	107904501	alpha-protein kinase 1
ath-u.5	ASG1	ATP-dependent DNA helicase
ath-u.5	AT4G30780	ATP-dependent DNA helicase
bra-r.6	103852376	uncharacterized LOC103852376
bra-r.6	103842383	uncharacterized LOC103842383
bra-r.6	103862001	uncharacterized LOC103862001
bna-r.1	111198175	uncharacterized LOC111198175
bna-r.1	125578533	uncharacterized LOC125578533
bna-r.1	125578530	uncharacterized LOC125578530
cit-r.1	102624004	uncharacterized LOC102624004
cit-r.1	102622246	hypothetical protein
gma-u.5	100792008	uncharacterized LOC100792008
gma-u.5	100794550	uncharacterized LOC100794550
gma-u.5	100807349	uncharacterized LOC100807349
vvi-u.5	100251901	uncharacterized LOC100251901
vvi-u.5	100262159	uncharacterized LOC100262159
ppo-u.5	7476451	uncharacterized LOC7476451
ppo-u.5	7489423	uncharacterized LOC7489423
mtr-u.5	11418676	uncharacterized LOC11418676
mtr-u.5	11445590	uncharacterized LOC11445590
mtr-u.5	25491211	uncharacterized LOC25491211
sly-u.5	101254582	uncharacterized LOC101254582
sly-u.5	101256298	uncharacterized LOC101256298
sly-u.5	104644784	uncharacterized LOC104644784
sot-r.1	102599998	uncharacterized LOC102599998
nta-r.1	107792825	uncharacterized LOC107792825
nta-r.1	107760261	uncharacterized LOC107760261
nta-r.1	107768428	uncharacterized LOC107768428
osa-u.5	4346441	uncharacterized LOC4346441
osa-u.5	4340346	uncharacterized LOC4340346
zma-u.5	100275680	uncharacterized LOC100275680
zma-u.5	103654180	uncharacterized LOC103654180
zma-u.5	100275560	uncharacterized LOC100275560
tae-r.2	123111507	uncharacterized LOC123111507
tae-r.2	123103321	uncharacterized LOC123103321
tae-r.2	123120741	uncharacterized LOC123120741
hvu-r.1	123395738	uncharacterized LOC123395738
hvu-r.1	123406942	uncharacterized LOC123406942
sbi-r.1	8076213	uncharacterized LOC8076213
bdi-r.1	100821383	uncharacterized LOC100821383
bdi-r.1	100845837	uncharacterized LOC100845837
bdi-r.1	100824406	uncharacterized LOC100824406

Top 50 coexpressed genes to 107912284 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107912284 (ghi-r.1 coexpression data)

CoexMap"107912284"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016695876.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016695876.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016695876.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107912284	ghi-r.1 for 107945630	ghi-r.1 for 107925219	ghi-r.1 for 107904501	ath-u.5 for ASG1	ath-u.5 for AT4G30780	bra-r.6 for 103852376	bra-r.6 for 103842383	bra-r.6 for 103862001	bna-r.1 for 111198175	bna-r.1 for 125578533	bna-r.1 for 125578530	cit-r.1 for 102624004	cit-r.1 for 102622246	gma-u.5 for 100792008	gma-u.5 for 100794550	gma-u.5 for 100807349	vvi-u.5 for 100251901	vvi-u.5 for 100262159	ppo-u.5 for 7476451	ppo-u.5 for 7489423	mtr-u.5 for 11418676	mtr-u.5 for 11445590	mtr-u.5 for 25491211	sly-u.5 for 101254582	sly-u.5 for 101256298	sly-u.5 for 104644784	sot-r.1 for 102599998	nta-r.1 for 107792825	nta-r.1 for 107760261	nta-r.1 for 107768428	osa-u.5 for 4346441	osa-u.5 for 4340346	zma-u.5 for 100275680	zma-u.5 for 103654180	zma-u.5 for 100275560	tae-r.2 for 123111507	tae-r.2 for 123103321	tae-r.2 for 123120741	hvu-r.1 for 123395738	hvu-r.1 for 123406942	sbi-r.1 for 8076213	bdi-r.1 for 100821383	bdi-r.1 for 100845837	bdi-r.1 for 100824406

Ortholog

Ortholog ID: 1454

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

ASG1

Function^*

uncharacterized LOC107912284

uncharacterized LOC107945630

probable serine/threonine-protein kinase dyrk1

ATP-dependent DNA helicase

uncharacterized LOC103852376

uncharacterized LOC103842383

uncharacterized LOC103834656

uncharacterized LOC125578533

uncharacterized LOC125578530

uncharacterized LOC106368630

uncharacterized LOC102624004

hypothetical protein

uncharacterized LOC100808512

uncharacterized LOC100791924

uncharacterized LOC100251901

uncharacterized LOC100262159

uncharacterized LOC7489423

uncharacterized LOC112325725

uncharacterized LOC11418676

uncharacterized LOC11445590

uncharacterized LOC25491211

uncharacterized LOC101256298

uncharacterized LOC104644784

uncharacterized LOC101251694

uncharacterized LOC102599998

uncharacterized LOC102590599

uncharacterized LOC107768428

uncharacterized LOC107781689

uncharacterized LOC107811876

uncharacterized LOC4346441

uncharacterized LOC4340346

uncharacterized LOC100275680

uncharacterized LOC103654180

uncharacterized LOC100275560

uncharacterized LOC123111507

uncharacterized LOC123103321

uncharacterized LOC123164453

uncharacterized LOC123395738

uncharacterized LOC123406942

uncharacterized LOC8076213

uncharacterized LOC100821383

uncharacterized LOC100845837

uncharacterized LOC100824406

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	5
ghi04016	MAPK signaling pathway - plant	5
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00592	alpha-Linolenic acid metabolism	3
gma00100	Steroid biosynthesis	2
gma00561	Glycerolipid metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi04141	Protein processing in endoplasmic reticulum	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2
sly04814	Motor proteins	2
sly00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	4
nta00670	One carbon pool by folate	4
nta00999	Biosynthesis of various plant secondary metabolites	4
nta01230	Biosynthesis of amino acids	4
nta01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	5
nta00908	Zeatin biosynthesis	4
nta00330	Arginine and proline metabolism	3
nta00260	Glycine, serine and threonine metabolism	3
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3
bdi00562	Inositol phosphate metabolism	2
bdi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

107912284

107945630

107927239

816944

829201

103852376

103842383

103834656

125578533

125578530

106368630

102624004

102622246

100808512

100791924

100251901

100262159

7489423

112325725

11418676

11445590

25491211

101256298

104644784

101251694

102599998

102590599

107768428

107781689

107811876

4346441

4340346

100275680

103654180

100275560

123111507

123103321

123164453

123395738

123406942

8076213

100821383

100845837

100824406

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	2	2	3	3	1	3	2	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107912284 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107912284 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**