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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912423   transcription factor LRL2 
 ath-u.5   AT5G64980   transcription factor 
 vvi-u.5   100853547   transcription factor LRL2 
 mtr-u.5   11431276   transcription factor bHLH7 
 sly-u.5   101252325   transcription factor UNE12 

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Top 50 coexpressed genes to 107912423 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912423 (ghi-r.1 coexpression data)

CoexMap"107912423"


ghiLOC107912423 | Entrez gene ID : 107912423    
Species ghi ath vvi mtr sly bdi hvu bra cit gma bna ppo sbi osa sot nta cre tae zma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016696091.1 [sequence] [blastp]
XP_016696092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016696091.1)
nucl 7,  cyto 1,  chlo 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016696092.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016696091.1)
other 8  (predict for XP_016696092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912423
ath-u.5
for
AT5G64980
vvi-u.5
for
100853547
mtr-u.5
for
11431276
sly-u.5
for
101252325


Ortholog ID: 13470
Species ghi ghi ath bra bna bna vvi mtr sly sot nta nta
Symbol LOC107922816 LOC107912423 AT5G64980 LOC103873934 LOC106397743 LOC106348003 LOC100853547 LOC11431276 LOC101252325 LOC102578458 LOC107795021 LOC107789014
Function* transcription factor bHLH7 transcription factor LRL2 transcription factor uncharacterized LOC103873934 uncharacterized LOC106397743 uncharacterized LOC106348003 transcription factor LRL2 transcription factor bHLH7 transcription factor UNE12 uncharacterized LOC102578458 bHLH transcription factor RHL1-like uncharacterized LOC107789014
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00514 Other types of O-glycan biosynthesis 2
ghi00511 Other glycan degradation 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 3
ghi01040 Biosynthesis of unsaturated fatty acids 3
ghi01212 Fatty acid metabolism 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta03010 Ribosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922816 107912423 836622 103873934 106397743 106348003 100853547 11431276 101252325 102578458 107795021 107789014
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