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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912817   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 ghi-r.1   107895874   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 ghi-r.1   121211310   ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like 
 ghi-r.1   107958222   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 ath-u.5   FNR1   ferredoxin-NADP[+]-oxidoreductase 1 
 ath-u.5   FNR2   ferredoxin-NADP[+]-oxidoreductase 2 
 bra-r.6   103837674   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 
 bra-r.6   103835814   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic 
 bna-r.1   106440749   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like 
 bna-r.1   106410536   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic 
 bna-r.1   106366338   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 
 cit-r.1   102621724   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 gma-u.5   100793840   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 gma-u.5   100802032   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 gma-u.5   100798467   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 vvi-u.5   100252241   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 vvi-u.5   100241976   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 ppo-u.5   18099184   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 ppo-u.5   18101088   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 mtr-u.5   11418744   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 sly-u.5   101261284   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 sly-u.5   101251845   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like 
 sot-r.1   102591399   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 sot-r.1   102583485   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like 
 nta-r.1   107760150   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic 
 nta-r.1   107772606   ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like 
 osa-u.5   LFNR1   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like 
 osa-u.5   4328000   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like 
 zma-u.5   541626   ferredoxin 
 zma-u.5   100282643   ferredoxin--NADP reductase, leaf isozyme 
 zma-u.5   542558   ferredoxin 
 tae-r.2   123164362   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 
 tae-r.2   123131585   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic 
 tae-r.2   123088498   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 
 hvu-r.1   123403451   ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like 
 hvu-r.1   123410596   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like 
 sbi-r.1   8077380   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 sbi-r.1   8067895   ferredoxin--NADP reductase, leaf isozyme, chloroplastic 
 bdi-r.1   100824314   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 
 bdi-r.1   100844703   ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic 

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Top 50 coexpressed genes to 107912817 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912817 (ghi-r.1 coexpression data)

CoexMap"107912817"


ghiLOC107912817 | Entrez gene ID : 107912817    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 2 2 1 2 2 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00195 [list] [network] Photosynthesis (164 genes)
GO BP
GO:0022900 [list] [network] electron transport chain  (224 genes)  IEA  
GO CC
GO:0098807 [list] [network] chloroplast thylakoid membrane protein complex  (9 genes)  IEA  
GO MF
GO:0003959 [list] [network] NADPH dehydrogenase activity  (12 genes)  IEA  
Protein XP_016696645.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_016696645.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016696645.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912817
ghi-r.1
for
107895874
ghi-r.1
for
121211310
ghi-r.1
for
107958222
ath-u.5
for
FNR1
ath-u.5
for
FNR2
bra-r.6
for
103837674
bra-r.6
for
103835814
bna-r.1
for
106440749
bna-r.1
for
106410536
bna-r.1
for
106366338
cit-r.1
for
102621724
gma-u.5
for
100793840
gma-u.5
for
100802032
gma-u.5
for
100798467
vvi-u.5
for
100252241
vvi-u.5
for
100241976
ppo-u.5
for
18099184
ppo-u.5
for
18101088
mtr-u.5
for
11418744
sly-u.5
for
101261284
sly-u.5
for
101251845
sot-r.1
for
102591399
sot-r.1
for
102583485
nta-r.1
for
107760150
nta-r.1
for
107772606
osa-u.5
for
LFNR1
osa-u.5
for
4328000
zma-u.5
for
541626
zma-u.5
for
100282643
zma-u.5
for
542558
tae-r.2
for
123164362
tae-r.2
for
123131585
tae-r.2
for
123088498
hvu-r.1
for
123403451
hvu-r.1
for
123410596
sbi-r.1
for
8077380
sbi-r.1
for
8067895
bdi-r.1
for
100824314
bdi-r.1
for
100844703


Ortholog ID: 3508
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107912817 LOC107895874 LOC107945802 FNR1 FNR2 LOC103837674 LOC103835814 LOC106440749 LOC106410536 LOC106415924 LOC102621724 LOC100793840 LOC100802032 LOC100798467 LOC100252241 LOC100241976 LOC18099184 LOC18101088 LOC11418744 LOC101261284 LOC101251845 LOC102591399 LOC102583485 LOC107760150 LOC107772606 LFNR1 LOC4328000 LOC541626 LOC100282643 LOC542558 LOC123088498 LOC123142939 LOC123148043 LOC123403451 LOC123410596 LOC8077380 LOC8067895 LOC100824314 LOC100844703
Function* ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin-NADP[+]-oxidoreductase 1 ferredoxin-NADP[+]-oxidoreductase 2 ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like ferredoxin ferredoxin--NADP reductase, leaf isozyme ferredoxin ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme, chloroplastic ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00710 Carbon fixation by Calvin cycle 8
ath00195 Photosynthesis 6
ath00010 Glycolysis / Gluconeogenesis 3
ath00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00195 Photosynthesis 6
bra00710 Carbon fixation by Calvin cycle 6
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00195 Photosynthesis 5
gma00030 Pentose phosphate pathway 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma04820 Cytoskeleton in muscle cells 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 6
gma01200 Carbon metabolism 6
gma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 7
vvi01200 Carbon metabolism 5
vvi00710 Carbon fixation by Calvin cycle 3
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 4
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 11
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00710 Carbon fixation by Calvin cycle 5
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 5
sly01200 Carbon metabolism 4
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00190 Oxidative phosphorylation 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot01200 Carbon metabolism 5
sot00710 Carbon fixation by Calvin cycle 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
sot01200 Carbon metabolism 6
sot00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00710 Carbon fixation by Calvin cycle 4
osa00195 Photosynthesis 4
osa00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00710 Carbon fixation by Calvin cycle 5
osa00195 Photosynthesis 4
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00195 Photosynthesis 5
tae00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00710 Carbon fixation by Calvin cycle 5
tae00195 Photosynthesis 3
tae00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00195 Photosynthesis 5
hvu00710 Carbon fixation by Calvin cycle 5
hvu00630 Glyoxylate and dicarboxylate metabolism 5
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00195 Photosynthesis 4
hvu00710 Carbon fixation by Calvin cycle 4
hvu00630 Glyoxylate and dicarboxylate metabolism 3
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
sbi03010 Ribosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107912817 107895874 107945802 836751 838591 103837674 103835814 106440749 106410536 106415924 102621724 100793840 100802032 100798467 100252241 100241976 18099184 18101088 11418744 101261284 101251845 102591399 102583485 107760150 107772606 4339874 4328000 541626 100282643 542558 123088498 123142939 123148043 123403451 123410596 8077380 8067895 100824314 100844703
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