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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913812   ATP phosphoribosyltransferase 2, chloroplastic 
 ghi-r.1   107938752   ATP phosphoribosyltransferase 2, chloroplastic 
 ghi-r.1   107928211   ATP phosphoribosyltransferase 2, chloroplastic 
 ghi-r.1   107898690   ATP phosphoribosyltransferase 1, chloroplastic 
 ath-u.5   ATP-PRT2   ATP phosphoribosyl transferase 2 
 ath-u.5   ATP-PRT1   ATP phosphoribosyl transferase 1 
 bra-r.6   103838635   ATP phosphoribosyltransferase 1, chloroplastic 
 bra-r.6   103871753   ATP phosphoribosyltransferase 2, chloroplastic 
 bra-r.6   103828719   ATP phosphoribosyltransferase 1, chloroplastic 
 bna-r.1   111212899   ATP phosphoribosyltransferase 1, chloroplastic-like 
 bna-r.1   106445767   ATP phosphoribosyltransferase 1, chloroplastic-like 
 bna-r.1   106400912   ATP phosphoribosyltransferase 2, chloroplastic 
 cit-r.1   102610975   ATP phosphoribosyltransferase 2, chloroplastic-like 
 gma-u.5   100817490   ATP phosphoribosyltransferase 
 gma-u.5   100792493   ATP phosphoribosyltransferase 2, chloroplastic 
 vvi-u.5   100256118   ATP phosphoribosyltransferase 2, chloroplastic 
 ppo-u.5   7455230   ATP phosphoribosyltransferase 2, chloroplastic 
 ppo-u.5   18098303   ATP phosphoribosyltransferase 2, chloroplastic 
 mtr-u.5   11421591   ATP phosphoribosyltransferase 2, chloroplastic 
 mtr-u.5   11438625   ATP phosphoribosyltransferase 2, chloroplastic 
 sly-u.5   101245890   ATP phosphoribosyltransferase 2, chloroplastic 
 sot-r.1   102596899   ATP phosphoribosyltransferase 2, chloroplastic 
 nta-r.1   107792258   ATP phosphoribosyltransferase 2, chloroplastic 
 nta-r.1   107781436   ATP phosphoribosyltransferase 2, chloroplastic-like 
 osa-u.5   4331530   ATP phosphoribosyltransferase, chloroplastic-like 
 zma-u.5   100193253   ATP phosphoribosyltransferase 2 chloroplastic 
 tae-r.2   123093639   ATP phosphoribosyltransferase, chloroplastic 
 tae-r.2   123098900   ATP phosphoribosyltransferase, chloroplastic 
 tae-r.2   123105841   ATP phosphoribosyltransferase, chloroplastic 
 hvu-r.1   123449752   ATP phosphoribosyltransferase, chloroplastic-like 
 sbi-r.1   110432925   ATP phosphoribosyltransferase, chloroplastic-like 
 bdi-r.1   100821967   ATP phosphoribosyltransferase, chloroplastic 
 cre-r.1   CHLRE_09g410650v5   uncharacterized protein 

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Top 50 coexpressed genes to 107913812 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107913812 (ghi-r.1 coexpression data)

CoexMap"107913812"


ghiLOC107913812 | Entrez gene ID : 107913812    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 2 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00340 [list] [network] Histidine metabolism (41 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0000105 [list] [network] L-histidine biosynthetic process  (21 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0003879 [list] [network] ATP phosphoribosyltransferase activity  (4 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (292 genes)  IEA  
Protein XP_016697948.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016697948.1)
Subcellular
localization
TargetP
chlo 4,  mito 3,  scret 3  (predict for XP_016697948.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913812
ghi-r.1
for
107938752
ghi-r.1
for
107928211
ghi-r.1
for
107898690
ath-u.5
for
ATP-PRT2
ath-u.5
for
ATP-PRT1
bra-r.6
for
103838635
bra-r.6
for
103871753
bra-r.6
for
103828719
bna-r.1
for
111212899
bna-r.1
for
106445767
bna-r.1
for
106400912
cit-r.1
for
102610975
gma-u.5
for
100817490
gma-u.5
for
100792493
vvi-u.5
for
100256118
ppo-u.5
for
7455230
ppo-u.5
for
18098303
mtr-u.5
for
11421591
mtr-u.5
for
11438625
sly-u.5
for
101245890
sot-r.1
for
102596899
nta-r.1
for
107792258
nta-r.1
for
107781436
osa-u.5
for
4331530
zma-u.5
for
100193253
tae-r.2
for
123093639
tae-r.2
for
123098900
tae-r.2
for
123105841
hvu-r.1
for
123449752
sbi-r.1
for
110432925
bdi-r.1
for
100821967
cre-r.1
for
CHLRE_09g410650v5


Ortholog ID: 5399
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107913812 LOC107928211 LOC107898690 ATP-PRT2 ATP-PRT1 LOC103838635 LOC103871753 LOC103828719 LOC111212899 LOC106346246 LOC106360679 LOC102610975 LOC100817490 LOC100792493 LOC100256118 LOC7455230 LOC18098303 LOC11421591 LOC11438625 LOC101245890 LOC102596899 LOC107792258 LOC107781436 LOC4331530 LOC100193253 LOC123093639 LOC123098900 LOC123105841 LOC123449752 LOC110432925 LOC100821967 CHLRE_09g410650v5
Function* ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 1 ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic-like ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic-like ATP phosphoribosyltransferase ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic-like ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase 2 chloroplastic ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 5
ghi01230 Biosynthesis of amino acids 4
ghi00340 Histidine metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi01230 Biosynthesis of amino acids 3
ghi00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 5
ath00910 Nitrogen metabolism 4
ath01240 Biosynthesis of cofactors 3
ath01310 Nitrogen cycle 3
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra01230 Biosynthesis of amino acids 3
bra00785 Lipoic acid metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 2
bra01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 5
bna00340 Histidine metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit01240 Biosynthesis of cofactors 2
cit00220 Arginine biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00740 Riboflavin metabolism 3
gma01240 Biosynthesis of cofactors 3
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 10
vvi03010 Ribosome 5
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr00564 Glycerophospholipid metabolism 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 12
sot01210 2-Oxocarboxylic acid metabolism 5
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01200 Carbon metabolism 4
sot00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 7
nta00270 Cysteine and methionine metabolism 6
nta00620 Pyruvate metabolism 6
nta00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 7
nta00270 Cysteine and methionine metabolism 6
nta00620 Pyruvate metabolism 6
nta00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00970 Aminoacyl-tRNA biosynthesis 4
osa01210 2-Oxocarboxylic acid metabolism 4
osa00290 Valine, leucine and isoleucine biosynthesis 3
osa00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma03010 Ribosome 5
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae00340 Histidine metabolism 6
tae00270 Cysteine and methionine metabolism 5
tae00190 Oxidative phosphorylation 3
tae00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00270 Cysteine and methionine metabolism 9
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00340 Histidine metabolism 3
tae00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00270 Cysteine and methionine metabolism 7
tae00290 Valine, leucine and isoleucine biosynthesis 6
tae00770 Pantothenate and CoA biosynthesis 6
tae01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 9
sbi04145 Phagosome 9
sbi04142 Lysosome 3
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00030 Pentose phosphate pathway 4
bdi01200 Carbon metabolism 4
bdi00270 Cysteine and methionine metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre01210 2-Oxocarboxylic acid metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00300 Lysine biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913812 107928211 107898690 837509 842175 103838635 103871753 103828719 111212899 106346246 106360679 102610975 100817490 100792493 100256118 7455230 18098303 11421591 11438625 101245890 102596899 107792258 107781436 4331530 100193253 123093639 123098900 123105841 123449752 110432925 100821967 66054882
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