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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913882   NADP-dependent malic enzyme 
 ath-u.5   NADP-ME1   NADP-malic enzyme 1 
 ath-u.5   NADP-ME2   NADP-malic enzyme 2 
 gma-u.5   100818219   NADP-dependent malic enzyme 
 gma-u.5   100804607   NADP-dependent malic enzyme 
 gma-u.5   100785718   NADP-dependent malic enzyme 
 vvi-u.5   100249166   NADP-dependent malic enzyme 
 vvi-u.5   NADP-ME   malate dehydrogenase (NADP+) 
 vvi-u.5   VVME2   malic enzyme 
 ppo-u.5   7461559   NADP-dependent malic enzyme-like 
 ppo-u.5   7476690   NADP-dependent malic enzyme 
 mtr-u.5   25490143   NADP-dependent malic enzyme 
 mtr-u.5   11434761   NADP-dependent malic enzyme 
 mtr-u.5   11419897   NADP-dependent malic enzyme 4, chloroplastic 
 sly-u.5   ME1   NADP-malic enzyme 
 sly-u.5   ME2   cytosolic NADP-malic enzyme 
 sly-u.5   101249193   NADP-dependent malic enzyme 
 osa-u.5   4338007   NADP-dependent malic enzyme, chloroplastic-like 
 osa-u.5   4324717   NADP-dependent malic enzyme 
 zma-u.5   542233   NADP malic enzyme 3 
 zma-u.5   542331   NADP-dependent malic enzyme 
 zma-u.5   542209   NADP malic enzyme 4 

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Top 50 coexpressed genes to 107913882 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107913882 (ghi-r.1 coexpression data)

CoexMap"107913882"


ghiLOC107913882 | Entrez gene ID : 107913882    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00620 [list] [network] Pyruvate metabolism (290 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0006108 [list] [network] malate metabolic process  (59 genes)  IEA  
GO:0006090 [list] [network] pyruvate metabolic process  (214 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0004473 [list] [network] malate dehydrogenase (decarboxylating) (NADP+) activity  (11 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (211 genes)  IEA  
Protein XP_016698040.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  mito_plas 1  (predict for XP_016698040.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016698040.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913882
ath-u.5
for
NADP-ME1
ath-u.5
for
NADP-ME2
gma-u.5
for
100818219
gma-u.5
for
100804607
gma-u.5
for
100785718
vvi-u.5
for
100249166
vvi-u.5
for
NADP-ME
vvi-u.5
for
VVME2
ppo-u.5
for
7461559
ppo-u.5
for
7476690
mtr-u.5
for
25490143
mtr-u.5
for
11434761
mtr-u.5
for
11419897
sly-u.5
for
ME1
sly-u.5
for
ME2
sly-u.5
for
101249193
osa-u.5
for
4338007
osa-u.5
for
4324717
zma-u.5
for
542233
zma-u.5
for
542331
zma-u.5
for
542209


Ortholog ID: 741
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC107897092 LOC107897353 NADP-ME4 NADP-ME2 LOC103850789 LOC103828269 LOC106348556 LOC106357581 LOC102577988 LOC102626397 LOC100782096 LOC100801564 LOC100249166 VVME2 LOC7470734 LOC11434761 LOC11412374 ME2 LOC101255777 LOC102603300 LOC102578500 LOC107804419 LOC107778847 LOC4338007 LOC4324717 LOC542209 LOC542233 LOC123062027 LOC123070746 LOC123444313 LOC123444382 LOC8075558 LOC8065884 LOC100832025 LOC100833074 CHLRE_06g251400v5 CHLRE_14g629700v5
Function* NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-malic enzyme 4 NADP-malic enzyme 2 NADP-dependent malic enzyme 2 NADP-dependent malic enzyme 1 NADP-dependent malic enzyme 3 NADP-dependent malic enzyme 1 NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme cytosolic NADP-malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme-like NADP-dependent malic enzyme, chloroplastic-like NADP-dependent malic enzyme NADP malic enzyme 4 NADP malic enzyme 3 NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme-like NADP-dependent malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
ghi04626 Plant-pathogen interaction 5
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 10
ath01200 Carbon metabolism 10
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 5
ath00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites 2
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00480 Glutathione metabolism 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 3
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma00620 Pyruvate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 3
gma00941 Flavonoid biosynthesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
mtr00620 Pyruvate metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 4
sot01200 Carbon metabolism 3
sot00620 Pyruvate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot04145 Phagosome 4
sot04148 Efferocytosis 3
sot03060 Protein export 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00010 Glycolysis / Gluconeogenesis 4
osa00620 Pyruvate metabolism 4
osa01230 Biosynthesis of amino acids 4
osa00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 5
osa00480 Glutathione metabolism 3
osa00030 Pentose phosphate pathway 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00710 Carbon fixation by Calvin cycle 6
zma00620 Pyruvate metabolism 5
zma00010 Glycolysis / Gluconeogenesis 4
zma00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi00030 Pentose phosphate pathway 3
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 2
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre00710 Carbon fixation by Calvin cycle 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897092 107897353 844314 831039 103850789 103828269 106348556 106357581 102577988 102626397 100782096 100801564 100249166 100233075 7470734 11434761 11412374 543522 101255777 102603300 102578500 107804419 107778847 4338007 4324717 542209 542233 123062027 123070746 123444313 123444382 8075558 8065884 100832025 100833074 5722193 5718362
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