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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914282   CDK5RAP1-like protein 
 ath-u.5   AT4G36390   Methylthiotransferase 
 gma-u.5   100812447   CDK5RAP1-like protein 
 gma-u.5   100799544   CDK5RAP1-like protein 
 vvi-u.5   100266017   CDK5RAP1-like protein 
 ppo-u.5   7480150   CDK5RAP1-like protein 
 mtr-u.5   11408076   CDK5RAP1-like protein 
 sly-u.5   101245311   CDK5RAP1-like protein 
 osa-u.5   4350829   CDK5RAP1-like protein 
 zma-u.5   103648137   CDK5RAP1-like protein 

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Top 50 coexpressed genes to 107914282 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914282 (ghi-r.1 coexpression data)

CoexMap"107914282"


ghiLOC107914282 | Entrez gene ID : 107914282    
Species ghi ath gma vvi ppo mtr sly osa zma cre cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045736 [list] [network] negative regulation of cyclin-dependent protein serine/threonine kinase activity  (23 genes)  IEA  
GO:0006400 [list] [network] tRNA modification  (158 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0035596 [list] [network] methylthiotransferase activity  (6 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (90 genes)  IEA  
Protein XP_016698641.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4,  cyto_mito 4  (predict for XP_016698641.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for XP_016698641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914282

.
ath-u.5
for
AT4G36390

.
gma-u.5
for
100812447

.
gma-u.5
for
100799544

.
vvi-u.5
for
100266017

.
ppo-u.5
for
7480150

.
mtr-u.5
for
11408076

.
sly-u.5
for
101245311

.
osa-u.5
for
4350829

.
zma-u.5
for
103648137

.


Ortholog ID: 9065
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G36390 LOC100799544 LOC100812447 LOC101245311 LOC4350829 LOC103648137 LOC103868546 LOC100266017 LOC7480150 LOC11408076 LOC123092107 LOC123085984 LOC123448328 LOC107897615 LOC107914282 LOC106448735 LOC106443763 CHLRE_11g467633v5 LOC8062684 LOC102597794 LOC102622909 LOC100821965 LOC107771927 LOC107818346
Function* Methylthiotransferase CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein uncharacterized protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra03060 Protein export 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00190 Oxidative phosphorylation 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna01240 Biosynthesis of cofactors 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna04016 MAPK signaling pathway - plant 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00900 Terpenoid backbone biosynthesis 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00030 Pentose phosphate pathway 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00030 Pentose phosphate pathway 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829791 100799544 100812447 101245311 4350829 103648137 103868546 100266017 7480150 11408076 123092107 123085984 123448328 107897615 107914282 106448735 106443763 5724364 8062684 102597794 102622909 100821965 107771927 107818346
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