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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916555   probable ribose-5-phosphate isomerase 2 
 ghi-r.1   107934514   probable ribose-5-phosphate isomerase 2 
 ghi-r.1   107946276   probable ribose-5-phosphate isomerase 2 
 ghi-r.1   107920983   probable ribose-5-phosphate isomerase 2 
 ath-u.5   RPI2   ribose-5-phosphate isomerase 2 
 ath-u.5   RSW10   Ribose 5-phosphate isomerase, type A protein 
 bra-r.6   103852702   probable ribose-5-phosphate isomerase 1 
 bra-r.6   103832793   probable ribose-5-phosphate isomerase 2 
 bra-r.6   103827594   probable ribose-5-phosphate isomerase 2 
 bna-r.1   125587003   probable ribose-5-phosphate isomerase 1 
 bna-r.1   106432962   probable ribose-5-phosphate isomerase 1 
 bna-r.1   125609847   probable ribose-5-phosphate isomerase 2 
 cit-r.1   102627714   probable ribose-5-phosphate isomerase 2 
 gma-u.5   100795150   probable ribose-5-phosphate isomerase 2 
 gma-u.5   100790894   probable ribose-5-phosphate isomerase 2 
 vvi-u.5   100257096   probable ribose-5-phosphate isomerase 2 
 vvi-u.5   100247460   probable ribose-5-phosphate isomerase 2 
 ppo-u.5   7472990   probable ribose-5-phosphate isomerase 2 
 ppo-u.5   7475541   probable ribose-5-phosphate isomerase 2 
 ppo-u.5   7482872   probable ribose-5-phosphate isomerase 2 
 mtr-u.5   11409058   probable ribose-5-phosphate isomerase 1 
 sly-u.5   101260137   probable ribose-5-phosphate isomerase 2 
 sot-r.1   102603019   probable ribose-5-phosphate isomerase 1 
 sot-r.1   102581814   probable ribose-5-phosphate isomerase 2 
 nta-r.1   107822075   putative ribose-5-phosphate isomerase 2 
 nta-r.1   107821545   putative ribose-5-phosphate isomerase 2 
 nta-r.1   107808764   putative ribose-5-phosphate isomerase 2 

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Top 50 coexpressed genes to 107916555 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916555 (ghi-r.1 coexpression data)

CoexMap"107916555"


ghiLOC107916555 | Entrez gene ID : 107916555    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa bdi tae zma sbi hvu cre
Paralog 4 2 3 3 1 2 2 3 1 1 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00030 [list] [network] Pentose phosphate pathway (139 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0009052 [list] [network] pentose-phosphate shunt, non-oxidative branch  (24 genes)  IEA  
GO CC
GO MF
GO:0004751 [list] [network] ribose-5-phosphate isomerase activity  (12 genes)  IEA  
Protein XP_016701317.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_016701317.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016701317.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916555
ghi-r.1
for
107934514
ghi-r.1
for
107946276
ghi-r.1
for
107920983
ath-u.5
for
RPI2
ath-u.5
for
RSW10
bra-r.6
for
103852702
bra-r.6
for
103832793
bra-r.6
for
103827594
bna-r.1
for
125587003
bna-r.1
for
106432962
bna-r.1
for
125609847
cit-r.1
for
102627714
gma-u.5
for
100795150
gma-u.5
for
100790894
vvi-u.5
for
100257096
vvi-u.5
for
100247460
ppo-u.5
for
7472990
ppo-u.5
for
7475541
ppo-u.5
for
7482872
mtr-u.5
for
11409058
sly-u.5
for
101260137
sot-r.1
for
102603019
sot-r.1
for
102581814
nta-r.1
for
107822075
nta-r.1
for
107821545
nta-r.1
for
107808764


Ortholog ID: 6476
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo ppo mtr sly sot sot nta nta nta
Symbol LOC107916555 LOC107934514 LOC107946276 RPI2 RSW10 LOC103852702 LOC103832793 LOC103827594 LOC125587003 LOC125609847 LOC106381915 LOC102627714 LOC100795150 LOC100790894 LOC100257096 LOC100247460 LOC7472990 LOC7475541 LOC7482872 LOC11409058 LOC101260137 LOC102603019 LOC102581814 LOC107822075 LOC107821545 LOC107786848
Function* probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 ribose-5-phosphate isomerase 2 Ribose 5-phosphate isomerase, type A protein probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 putative ribose-5-phosphate isomerase 2 putative ribose-5-phosphate isomerase 2 putative ribose-5-phosphate isomerase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath01230 Biosynthesis of amino acids 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi03082 ATP-dependent chromatin remodeling 3
vvi00030 Pentose phosphate pathway 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00030 Pentose phosphate pathway 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly00592 alpha-Linolenic acid metabolism 3
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916555 107934514 107946276 814657 843450 103852702 103832793 103827594 125587003 125609847 106381915 102627714 100795150 100790894 100257096 100247460 7472990 7475541 7482872 11409058 101260137 102603019 102581814 107822075 107821545 107786848
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