Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916715   polynucleotide 3'-phosphatase ZDP 
 ghi-r.1   107943057   polynucleotide 3'-phosphatase ZDP 
 ath-u.5   AT3G14890   phosphoesterase 
 bra-r.6   103869977   polynucleotide 3'-phosphatase ZDP 
 bra-r.6   103859597   polynucleotide 3'-phosphatase ZDP 
 bna-r.1   106389200   polynucleotide 3'-phosphatase ZDP 
 bna-r.1   106401736   polynucleotide 3'-phosphatase ZDP-like 
 bna-r.1   106423563   polynucleotide 3'-phosphatase ZDP 
 cit-r.1   102622568   polynucleotide 3'-phosphatase ZDP 
 gma-u.5   100796730   polynucleotide 3'-phosphatase ZDP 
 gma-u.5   100788501   polynucleotide 3'-phosphatase ZDP 
 vvi-u.5   100243613   polynucleotide 3'-phosphatase ZDP 
 ppo-u.5   18095483   polynucleotide 3'-phosphatase ZDP 
 mtr-u.5   25497280   polynucleotide 3'-phosphatase ZDP 
 mtr-u.5   25496488   polynucleotide 3'-phosphatase ZDP 
 sly-u.5   101244972   polynucleotide 3'-phosphatase ZDP 
 sot-r.1   102582395   polynucleotide 3'-phosphatase ZDP 
 nta-r.1   107816055   polynucleotide 3'-phosphatase ZDP 
 nta-r.1   107786424   polynucleotide 3'-phosphatase ZDP-like 
 osa-u.5   4327876   polynucleotide 3'-phosphatase ZDP 
 zma-u.5   541878   diphosphonucleotide phosphatase 2 
 tae-r.2   123061976   polynucleotide 3'-phosphatase ZDP 
 tae-r.2   123070675   polynucleotide 3'-phosphatase ZDP 
 tae-r.2   123079089   polynucleotide 3'-phosphatase ZDP 
 hvu-r.1   123444350   polynucleotide 3'-phosphatase ZDP 
 sbi-r.1   8075544   polynucleotide 3'-phosphatase ZDP 
 bdi-r.1   100841627   polynucleotide 3'-phosphatase ZDP 
 bdi-r.1   100844676   polynucleotide 3'-phosphatase ZDP 
 cre-r.1   CHLRE_09g388726v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107916715 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107916715 (ghi-r.1 coexpression data)

CoexMap"107916715"


ghiLOC107916715 | Entrez gene ID : 107916715    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 2 1 1 2 1 1 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03410 [list] [network] Base excision repair (108 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (557 genes)  IEA  
GO CC
GO MF
GO:0046403 [list] [network] polynucleotide 3'-phosphatase activity  (2 genes)  IEA  
GO:0046404 [list] [network] ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity  (2 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (1296 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016701553.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_016701553.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016701553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916715
ghi-r.1
for
107943057
ath-u.5
for
AT3G14890
bra-r.6
for
103869977
bra-r.6
for
103859597
bna-r.1
for
106389200
bna-r.1
for
106401736
bna-r.1
for
106423563
cit-r.1
for
102622568
gma-u.5
for
100796730
gma-u.5
for
100788501
vvi-u.5
for
100243613
ppo-u.5
for
18095483
mtr-u.5
for
25497280
mtr-u.5
for
25496488
sly-u.5
for
101244972
sot-r.1
for
102582395
nta-r.1
for
107816055
nta-r.1
for
107786424
osa-u.5
for
4327876
zma-u.5
for
541878
tae-r.2
for
123061976
tae-r.2
for
123070675
tae-r.2
for
123079089
hvu-r.1
for
123444350
sbi-r.1
for
8075544
bdi-r.1
for
100841627
bdi-r.1
for
100844676
cre-r.1
for
CHLRE_09g388726v5


Ortholog ID: 7209
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107916715 LOC107943057 AT3G14890 LOC103869977 LOC103859597 LOC106389200 LOC106401736 LOC106423563 LOC102622568 LOC100796730 LOC100788501 LOC100243613 LOC18095483 LOC25497280 LOC25496488 LOC101244972 LOC102582395 LOC107816055 LOC107786424 LOC4327876 LOC541878 LOC123061976 LOC123070675 LOC123079089 LOC123444350 LOC8075544 LOC100841627 LOC100844676 CHLRE_09g388726v5
Function* polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP phosphoesterase polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP-like polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP-like polynucleotide 3'-phosphatase ZDP diphosphonucleotide phosphatase 2 polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03040 Spliceosome 3
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
cit03010 Ribosome 3
cit03030 DNA replication 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03410 Base excision repair 3
ppo03018 RNA degradation 2
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 3
sot03030 DNA replication 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa03013 Nucleocytoplasmic transport 3
osa03015 mRNA surveillance pathway 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03410 Base excision repair 3
zma03083 Polycomb repressive complex 2
zma03430 Mismatch repair 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 5
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916715 107943057 820718 103869977 103859597 106389200 106401736 106423563 102622568 100796730 100788501 100243613 18095483 25497280 25496488 101244972 102582395 107816055 107786424 4327876 541878 123061976 123070675 123079089 123444350 8075544 100841627 100844676 5720595
The preparation time of this page was 0.2 [sec].