ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107916928	solute carrier family 25 member 44
ghi-r.1	107901005	solute carrier family 25 member 44
ghi-r.1	107893712	solute carrier family 25 member 44
ghi-r.1	107906077	solute carrier family 25 member 44
ath-u.5	AT5G15640	Mitochondrial substrate carrier family protein
ath-u.5	AT5G26200	Mitochondrial substrate carrier family protein
ath-u.5	AT1G72820	Mitochondrial substrate carrier family protein
bra-r.6	103830780	solute carrier family 25 member 44
bra-r.6	103831784	solute carrier family 25 member 44
bna-r.1	106432539	solute carrier family 25 member 44
bna-r.1	106406402	solute carrier family 25 member 44
bna-r.1	106406269	solute carrier family 25 member 44-like
cit-r.1	102609468	uncharacterized LOC102609468
cit-r.1	102624366	uncharacterized LOC102624366
cit-r.1	102612100	uncharacterized LOC102612100
gma-u.5	100803360	solute carrier family 25 member 44
gma-u.5	100819519	solute carrier family 25 member 44
gma-u.5	100815068	solute carrier family 25 member 44
vvi-u.5	100242630	nicotinamide adenine dinucleotide transporter 2, mitochondrial
vvi-u.5	100252641	uncharacterized LOC100252641
vvi-u.5	100254860	uncharacterized LOC100254860
ppo-u.5	7470674	uncharacterized LOC7470674
ppo-u.5	7476666	uncharacterized LOC7476666
ppo-u.5	7480589	uncharacterized LOC7480589
mtr-u.5	11420929	solute carrier family 25 member 44
mtr-u.5	25495417	solute carrier family 25 member 44
mtr-u.5	25497591	solute carrier family 25 member 44
sly-u.5	101253441	uncharacterized LOC101253441
sly-u.5	101265217	uncharacterized LOC101265217
sot-r.1	102604995	solute carrier family 25 member 44
sot-r.1	102592977	solute carrier family 25 member 44-like
nta-r.1	107780175	uncharacterized LOC107780175
nta-r.1	107777248	uncharacterized LOC107777248
nta-r.1	107787714	uncharacterized LOC107787714
osa-u.5	4348556	uncharacterized LOC4348556
osa-u.5	4334148	uncharacterized LOC4334148
osa-u.5	4331797	uncharacterized LOC4331797
zma-u.5	100283427	mitochondrial carrier-like protein
zma-u.5	100384216	uncharacterized LOC100384216
zma-u.5	100284570	uncharacterized LOC100284570
tae-r.2	123044084	solute carrier family 25 member 44
tae-r.2	123051957	solute carrier family 25 member 44
tae-r.2	123084740	solute carrier family 25 member 44
hvu-r.1	123452285	solute carrier family 25 member 44
hvu-r.1	123449591	solute carrier family 25 member 44-like
hvu-r.1	123425152	solute carrier family 25 member 44-like
sbi-r.1	8059798	solute carrier family 25 member 44
sbi-r.1	8086310	solute carrier family 25 member 44
sbi-r.1	8067560	solute carrier family 25 member 44
bdi-r.1	100821755	cleavage stimulation factor subunit 50
bdi-r.1	100824069	solute carrier family 25 member 44
bdi-r.1	100842176	solute carrier family 25 member 44
cre-r.1	CHLRE_02g092050v5	uncharacterized protein

Top 50 coexpressed genes to 107916928 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107916928 (ghi-r.1 coexpression data)

CoexMap"107916928"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040956274.1 [sequence] [blastp]
XP_040956275.1 [sequence] [blastp]
XP_040956276.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, mito 1, chlo 1, plas 1, cyto_mito 1	(predict for XP_040956274.1)
cyto 7, mito 1, chlo 1, plas 1, cyto_mito 1	(predict for XP_040956275.1)
cyto 6, pero 1, cysk 1	(predict for XP_040956276.1)

Subcellular
localization
TargetP

other 9	(predict for XP_040956274.1)
other 9	(predict for XP_040956275.1)
other 9	(predict for XP_040956276.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107916928	ghi-r.1 for 107901005	ghi-r.1 for 107893712	ghi-r.1 for 107906077	ath-u.5 for AT5G15640	ath-u.5 for AT5G26200	ath-u.5 for AT1G72820	bra-r.6 for 103830780	bra-r.6 for 103831784	bna-r.1 for 106432539	bna-r.1 for 106406402	bna-r.1 for 106406269	cit-r.1 for 102609468	cit-r.1 for 102624366	cit-r.1 for 102612100	gma-u.5 for 100803360	gma-u.5 for 100819519	gma-u.5 for 100815068	vvi-u.5 for 100242630	vvi-u.5 for 100252641	vvi-u.5 for 100254860	ppo-u.5 for 7470674	ppo-u.5 for 7476666	ppo-u.5 for 7480589	mtr-u.5 for 11420929	mtr-u.5 for 25495417	mtr-u.5 for 25497591	sly-u.5 for 101253441	sly-u.5 for 101265217	sot-r.1 for 102604995	sot-r.1 for 102592977	nta-r.1 for 107780175	nta-r.1 for 107777248	nta-r.1 for 107787714	osa-u.5 for 4348556	osa-u.5 for 4334148	osa-u.5 for 4331797	zma-u.5 for 100283427	zma-u.5 for 100384216	zma-u.5 for 100284570	tae-r.2 for 123044084	tae-r.2 for 123051957	tae-r.2 for 123084740	hvu-r.1 for 123452285	hvu-r.1 for 123449591	hvu-r.1 for 123425152	sbi-r.1 for 8059798	sbi-r.1 for 8086310	sbi-r.1 for 8067560	bdi-r.1 for 100821755	bdi-r.1 for 100824069	bdi-r.1 for 100842176	cre-r.1 for CHLRE_02g092050v5

Ortholog

Ortholog ID: 757

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

solute carrier family 25 member 44

Mitochondrial substrate carrier family protein

solute carrier family 25 member 44

solute carrier family 25 member 44-like

uncharacterized LOC102609468

uncharacterized LOC102624366

uncharacterized LOC102612100

solute carrier family 25 member 44

nicotinamide adenine dinucleotide transporter 2, mitochondrial

uncharacterized LOC100254860

uncharacterized LOC100258363

uncharacterized LOC7470674

uncharacterized LOC7476666

uncharacterized LOC7480589

solute carrier family 25 member 44

uncharacterized LOC101253441

uncharacterized LOC101265217

solute carrier family 25 member 44

uncharacterized LOC107780175

uncharacterized LOC107807503

uncharacterized LOC107813499

uncharacterized LOC4334148

uncharacterized LOC4331797

uncharacterized LOC4326984

mitochondrial carrier-like protein

uncharacterized LOC100284570

Mitochondrial substrate carrier family protein

solute carrier family 25 member 44

solute carrier family 25 member 44-like

solute carrier family 25 member 44

cleavage stimulation factor subunit 50

solute carrier family 25 member 44

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00910	Nitrogen metabolism	4
ath01310	Nitrogen cycle	3
ath00030	Pentose phosphate pathway	2
ath00480	Glutathione metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	4
bna00230	Purine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00220	Arginine biosynthesis	2
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04148	Efferocytosis	2
sly00190	Oxidative phosphorylation	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	9
sot01230	Biosynthesis of amino acids	9
sot04626	Plant-pathogen interaction	2
sot00999	Biosynthesis of various plant secondary metabolites	2
sot00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	2
sot00561	Glycerolipid metabolism	2
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	5
nta04626	Plant-pathogen interaction	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3
bdi00020	Citrate cycle (TCA cycle)	2
bdi01200	Carbon metabolism	2
bdi01210	2-Oxocarboxylic acid metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

107906077

107950359

107961651

831418

832689

843613

103856153

106432539

106406402

106348569

102609468

102624366

102612100

100803360

100819519

100814858

100242630

100254860

100258363

7470674

7476666

7480589

11420929

25500526

101253441

101265217

102604995

102579058

107780175

107807503

107813499

4334148

4331797

4326984

100283427

100284570

100274176

123093351

123187838

123105059

123452285

123449591

123425152

8059798

8086310

110430979

100821755

100824069

100842176

5727495

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Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	3	3	2	2	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107916928 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107916928 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**